| Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea SM Sowell, LJ Wilhelm, AD Norbeck, MS Lipton, CD Nicora, DF Barofsky, ... The ISME journal 3 (1), 93-105, 2009 | 329 | 2009 |
| Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II TS Ream, JR Haag, AT Wierzbicki, CD Nicora, AD Norbeck, JK Zhu, ... Molecular cell 33 (2), 192-203, 2009 | 271 | 2009 |
| Genome-centric view of carbon processing in thawing permafrost BJ Woodcroft, CM Singleton, JA Boyd, PN Evans, JB Emerson, ... Nature 560 (7716), 49-54, 2018 | 267 | 2018 |
| In vitro transcription activities of Pol IV, Pol V, and RDR2 reveal coupling of Pol IV and RDR2 for dsRNA synthesis in plant RNA silencing JR Haag, TS Ream, M Marasco, CD Nicora, AD Norbeck, L Pasa-Tolic, ... Molecular cell 48 (5), 811-818, 2012 | 212 | 2012 |
| MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape VD Menachery, A Schäfer, KE Burnum-Johnson, HD Mitchell, AJ Eisfeld, ... Proceedings of the National Academy of Sciences 115 (5), E1012-E1021, 2018 | 174 | 2018 |
| Metabolic interdependencies between phylogenetically novel fermenters and respiratory organisms in an unconfined aquifer KC Wrighton, CJ Castelle, MJ Wilkins, LA Hug, I Sharon, BC Thomas, ... The ISME journal 8 (7), 1452-1463, 2014 | 168 | 2014 |
| MPLEx: a robust and universal protocol for single-sample integrative proteomic, metabolomic, and lipidomic analyses ES Nakayasu, CD Nicora, AC Sims, KE Burnum-Johnson, YM Kim, ... MSystems 1 (3), e00043-16, 2016 | 146 | 2016 |
| Proteogenomic Monitoring of Geobacter Physiology during Stimulated Uranium Bioremediation MJ Wilkins, NC VerBerkmoes, KH Williams, SJ Callister, PJ Mouser, ... Applied and environmental microbiology 75 (20), 6591-6599, 2009 | 145 | 2009 |
| Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens FO Aylward, KE Burnum, JJ Scott, G Suen, SG Tringe, SM Adams, ... The ISME journal 6 (9), 1688-1701, 2012 | 139 | 2012 |
| Phosphoproteome profiling of human skin fibroblast cells in response to low-and high-dose irradiation F Yang, DL Stenoien, EF Strittmatter, J Wang, L Ding, MS Lipton, ... Journal of proteome research 5 (5), 1252-1260, 2006 | 132 | 2006 |
| Evidence supporting dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1 KM DeAngelis, D Sharma, R Varney, B Simmons, NG Isern, LM Markilllie, ... Frontiers in microbiology 4, 280, 2013 | 123 | 2013 |
| Conservation of protein abundance patterns reveals the regulatory architecture of the EGFR-MAPK pathway T Shi, M Niepel, JE McDermott, Y Gao, CD Nicora, WB Chrisler, ... Science Signaling 9 (436), rs6-rs6, 2016 | 119 | 2016 |
| The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol J Sun, JD Todd, JC Thrash, Y Qian, MC Qian, B Temperton, J Guo, ... Nature microbiology 1 (8), 1-5, 2016 | 117 | 2016 |
| Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem LM Solden, AE Naas, S Roux, RA Daly, WB Collins, CD Nicora, ... Nature microbiology 3 (11), 1274-1284, 2018 | 105 | 2018 |
| New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11 LM Solden, DW Hoyt, WB Collins, JE Plank, RA Daly, E Hildebrand, ... The ISME journal 11 (3), 691-703, 2017 | 105 | 2017 |
| Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens FO Aylward, KE Burnum-Johnson, SG Tringe, C Teiling, DM Tremmel, ... Applied and Environmental Microbiology 79 (12), 3770-3778, 2013 | 104 | 2013 |
| Multiomics resolution of molecular events during a day in the life of Chlamydomonas D Strenkert, S Schmollinger, SD Gallaher, PA Salomé, SO Purvine, ... Proceedings of the National Academy of Sciences 116 (6), 2374-2383, 2019 | 102 | 2019 |
| Simple sodium dodecyl sulfate-assisted sample preparation method for LC-MS-based proteomics applications JY Zhou, GP Dann, T Shi, L Wang, X Gao, D Su, CD Nicora, AK Shukla, ... Analytical chemistry 84 (6), 2862-2867, 2012 | 90 | 2012 |
| Suite of activity-based probes for cellulose-degrading enzymes LM Chauvigné-Hines, LN Anderson, HM Weaver, JN Brown, PK Koech, ... Journal of the American Chemical Society 134 (50), 20521-20532, 2012 | 85 | 2012 |
| The identification of novel potential injury mechanisms and candidate biomarkers in renal allograft rejection by quantitative proteomics TK Sigdel, N Salomonis, CD Nicora, S Ryu, J He, V Dinh, DJ Orton, ... Molecular & Cellular Proteomics 13 (2), 621-631, 2014 | 82 | 2014 |
