| MedlineRanker: flexible ranking of biomedical literature JF Fontaine, A Barbosa-Silva, M Schaefer, MR Huska, EM Muro, ... Nucleic acids research 37 (suppl_2), W141-W146, 2009 | 284 | 2009 |
| Gene function in early mouse embryonic stem cell differentiation KH Sene, CJ Porter, G Palidwor, C Perez-Iratxeta, EM Muro, PA Campbell, ... BMC genomics 8, 1-21, 2007 | 164 | 2007 |
| Study of stem cell function using microarray experiments C Perez-Iratxeta, G Palidwor, CJ Porter, NA Sanche, MR Huska, ... FEBS letters 579 (8), 1795-1801, 2005 | 94 | 2005 |
| Functional evidence of post-transcriptional regulation by pseudogenes EM Muro, N Mah, MA Andrade-Navarro Biochimie 93 (11), 1916-1921, 2011 | 88 | 2011 |
| Co-regulation of paralog genes in the three-dimensional chromatin architecture J Ibn-Salem, EM Muro, MA Andrade-Navarro Nucleic acids research 45 (1), 81-91, 2017 | 63 | 2017 |
| Pseudogenes as an alternative source of natural antisense transcripts EM Muro, MA Andrade-Navarro BMC evolutionary biology 10 (1), 1-7, 2010 | 51 | 2010 |
| A roadmap of constitutive NF-κB activity in Hodgkin lymphoma: Dominant roles of p50 and p52 revealed by genome-wide analyses KAP de Oliveira, E Kaergel, M Heinig, JF Fontaine, G Patone, EM Muro, ... Genome medicine 8 (1), 1-16, 2016 | 47 | 2016 |
| Comprehensive translational control of tyrosine kinase expression by upstream open reading frames K Wethmar, J Schulz, EM Muro, S Talyan, MA Andrade-Navarro, A Leutz Oncogene 35 (13), 1736-1742, 2016 | 35 | 2016 |
| Identification of gene 3′ ends by automated EST cluster analysis EM Muro, R Herrington, S Janmohamed, C Frelin, MA Andrade-Navarro, ... Proceedings of the National Academy of Sciences 105 (51), 20286-20290, 2008 | 28 | 2008 |
| Self-organized critical random Boolean networks B Luque, FJ Ballesteros, EM Muro Physical Review E 63 (5), 051913, 2001 | 28 | 2001 |
| Simulation of plasticity in the adult visual cortex MA Andrade, EM Muro, F Morán Biological Cybernetics 84, 445-451, 2001 | 26 | 2001 |
| StemBase: a resource for the analysis of stem cell gene expression data CJ Porter, GA Palidwor, R Sandie, PM Krzyzanowski, EM Muro, ... Stem Cell Assays, 137-148, 2007 | 24 | 2007 |
| Recent developments in StemBase: a tool to study gene expression in human and murine stem cells R Sandie, GA Palidwor, MR Huska, CJ Porter, PM Krzyzanowski, ... BMC research notes 2 (1), 1-6, 2009 | 22 | 2009 |
| The pseudogenes of Mycobacterium leprae reveal the functional relevance of gene order within operons EM Muro, N Mah, G Moreno-Hagelsieb, MA Andrade-Navarro Nucleic acids research 39 (5), 1732-1738, 2011 | 20 | 2011 |
| ChIP on SNP-chip for genome-wide analysis of human histone H4 hyperacetylation JA McCann, EM Muro, C Palmer, G Palidwor, CJ Porter, ... BMC genomics 8 (1), 1-8, 2007 | 17 | 2007 |
| Computational approaches to discovering noncoding RNA PM Krzyzanowski, EM Muro, MA Andrade‐Navarro Wiley Interdisciplinary Reviews: RNA 3 (4), 567-579, 2012 | 16 | 2012 |
| Identification of transcribed protein coding sequence remnants within lincRNAs S Talyan, MA Andrade-Navarro, EM Muro Nucleic Acids Research 46 (17), 8720-8729, 2018 | 14 | 2018 |
| The distributions of protein coding genes within chromatin domains in relation to human disease EM Muro, J Ibn-Salem, MA Andrade-Navarro Epigenetics & Chromatin 12 (1), 1-10, 2019 | 9 | 2019 |
| Integration of expressed sequence tag data flanking predicted RNA secondary structures facilitates novel non-coding RNA discovery PM Krzyzanowski, FD Price, EM Muro, MA Rudnicki, ... PLoS One 6 (6), e20561, 2011 | 7 | 2011 |
| Amplification of the Gene Ontology annotation of Affymetrix probe sets EM Muro, C Perez-Iratxeta, MA Andrade-Navarro BMC bioinformatics 7 (1), 1-6, 2006 | 7 | 2006 |
