Sucheendra K. Palaniappan
Sucheendra K. Palaniappan
Senior Scientist, PhD Computer Science
Verified email at - Homepage
Cited by
Cited by
Network medicine
J Loscalzo
Harvard University Press, 2017
Toward community standards and software for whole-cell modeling
D Waltemath, J Karr, F Bergmann, V Chelliah, M Hucka, M Krantz, ...
IEEE Transactions on Biomedical Engineering, 2016
Statistical model checking based calibration and analysis of bio-pathway models
SK Palaniappan, BM Gyori, B Liu, D Hsu, PS Thiagarajan
International Conference on Computational Methods in Systems Biology, 120-134, 2013
Innate immune memory and homeostasis may be conferred through crosstalk between the TLR3 and TLR7 pathways
B Liu, Q Liu, L Yang, SK Palaniappan, I Bahar, PS Thiagarajan, JL Ding
Science signaling 9 (436), ra70-ra70, 2016
Approximate probabilistic analysis of biopathway dynamics
B Liu, A Hagiescu, SK Palaniappan, B Chattopadhyay, Z Cui, WF Wong, ...
Bioinformatics 28 (11), 1508-1516, 2012
A hybrid factored frontier algorithm for dynamic Bayesian networks with a biopathways application
SK Palaniappan, S Akshay, B Liu, B Genest, PS Thiagarajan
IEEE/ACM Transactions on Computational biology and bioinformatics 9 (5 …, 2012
T-PAIR: Temporal Node-pair Embedding for Automatic Biomedical Hypothesis Generation
U Akujuobi, M Spranger, SK Palaniappan, X Zhang
IEEE Transactions on Knowledge and Data Engineering, 2020
Improved statistical model checking methods for pathway analysis
CH Koh, SK Palaniappan, PS Thiagarajan, L Wong
BMC bioinformatics 13 (Suppl 17), S15, 2012
Abstracting the dynamics of biological pathways using information theory: a case study of apoptosis pathway
SK Palaniappan, F Bertaux, M Pichené, E Fabre, G Batt, B Genest
Bioinformatics 33 (13), 1980-1986, 2017
Leveraging pre-trained language models for mining microbiome-disease relationships
N Karkera, S Acharya, SK Palaniappan
BMC bioinformatics 24 (1), 290, 2023
SYLARAS: a platform for the statistical analysis and visual display of systemic immunoprofiling data and its application to glioblastoma
GJ Baker, JL Muhlich, SK Palaniappan, JK Moore, SH Davis, S Santagata, ...
Cell systems 11 (3), 272-285. e9, 2020
A look-ahead simulation algorithm for dbn models of biochemical pathways
SK Palaniappan, M Pichené, G Batt, E Fabre, B Genest
Hybrid Systems Biology: 5th International Workshop, HSB 2016, Grenoble …, 2016
Computational systems biology
SK Palaniappan, A Yachie-Kinoshita, S Ghosh
Academic Press, 2019
Optimizing machine-learning models for mutagenicity prediction through better feature selection
NK Shinada, N Koyama, M Ikemori, T Nishioka, S Hitaoka, A Hakura, ...
Mutagenesis 37 (3-4), 191-202, 2022
Probabilistic verification of partially observable dynamical systems
BM Gyori, D Paulin, SK Palaniappan
arXiv preprint arXiv:1411.0976, 2014
GPU code generation for ODE-based applications with phased shared-data access patterns
A Hagiescu, B Liu, R Ramanathan, SK Palaniappan, Z Cui, ...
ACM Transactions on Architecture and Code Optimization (TACO) 10 (4), 1-19, 2013
Dynamic Bayesian networks: A factored model of probabilistic dynamics
SK Palaniappan, PS Thiagarajan
International Symposium on Automated Technology for Verification and …, 2012
Large scale text mining for deriving useful insights: a case study focused on microbiome
SAJA Ahmed, N Bapatdhar, BP Kumar, S Ghosh, A Yachie, ...
Frontiers in Physiology 13, 933069, 2022
Building a reciprocal recommendation system at scale from scratch: Learnings from one of Japan’s prominent dating applications
R Ramanathan, NK Shinada, SK Palaniappan
Proceedings of the 14th ACM Conference on Recommender Systems, 566-567, 2020
Discrete Stochastic Abstraction of Biological Pathway Dynamics: A case study of the Apoptosis Pathway
S Palaniappan, F Bertaux, M Pichene, E Fabre, G Batt, B Genest
Bioinformatics 33 (13), 1980-1986, 2017
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