| Conserved cell types with divergent features in human versus mouse cortex RD Hodge, TE Bakken, JA Miller, KA Smith, ER Barkan, LT Graybuck, ... Nature 573 (7772), 61-68, 2019 | 1442 | 2019 |
| Eleven grand challenges in single-cell data science D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... Genome biology 21 (1), 1-35, 2020 | 1007 | 2020 |
| A comparison of automatic cell identification methods for single-cell RNA sequencing data T Abdelaal, L Michielsen, D Cats, D Hoogduin, H Mei, MJT Reinders, ... Genome biology 20, 1-19, 2019 | 497 | 2019 |
| Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells I Gupta, PG Collier, B Haase, A Mahfouz, A Joglekar, T Floyd, ... Nature biotechnology 36 (12), 1197-1202, 2018 | 292 | 2018 |
| Timing and localization of human dystrophin isoform expression provide insights into the cognitive phenotype of Duchenne muscular dystrophy HEKBPFL Nathalie Doorenweerd, Ahmed Mahfouz, Maaike van Putten, Rajaram ... Scientific Reports 7 (1), 12575, 2017 | 181 | 2017 |
| The single-cell eQTLGen consortium MGP van der Wijst, DH de Vries, HE Groot, G Trynka, CC Hon, MJ Bonder, ... Elife 9, 2020 | 177 | 2020 |
| Fast localization of the optic disc using projection of image features AE Mahfouz, AS Fahmy IEEE Transactions on Image Processing 19 (12), 3285-3289, 2010 | 167 | 2010 |
| RNA sequencing data integration reveals an miRNA interactome of osteoarthritis cartilage RC de Almeida, YFM Ramos, A Mahfouz, W den Hollander, N Lakenberg, ... Annals of the rheumatic diseases 78 (2), 270-277, 2019 | 165 | 2019 |
| A spatially resolved brain region-and cell type-specific isoform atlas of the postnatal mouse brain A Joglekar, A Prjibelski, A Mahfouz, P Collier, S Lin, AK Schlusche, ... Nature Communications 12 (1), 463, 2021 | 154 | 2021 |
| SpaGE: Spatial Gene Enhancement using scRNA-seq T Abdelaal, S Mourragui, A Mahfouz, MJT Reinders Nucleic acids research 48 (18), e107-e107, 2020 | 129 | 2020 |
| High-dimensional cytometric analysis of colorectal cancer reveals novel mediators of antitumour immunity NL de Vries, V Van Unen, ME Ijsselsteijn, T Abdelaal, R Van Der Breggen, ... Gut 69 (4), 691-703, 2020 | 121 | 2020 |
| Genome-wide coexpression of steroid receptors in the mouse brain: Identifying signaling pathways and functionally coordinated regions A Mahfouz, BPF Lelieveldt, A Grefhorst, LTCM van Weert, IM Mol, ... Proceedings of the National Academy of Sciences 113 (10), 2738-2743, 2016 | 83 | 2016 |
| NeuroD factors discriminate mineralocorticoid from glucocorticoid receptor DNA binding in the male rat brain L van Weert, JC Buurstede, A Mahfouz, PSM Braakhuis, JAE Polman, ... Endocrinology, 2017 | 82 | 2017 |
| Analyzing cell-type-specific dynamics of metabolism in kidney repair G Wang, B Heijs, S Kostidis, A Mahfouz, RGJ Rietjens, R Bijkerk, ... Nature Metabolism 4 (9), 1109-1118, 2022 | 78 | 2022 |
| Visualizing the spatial gene expression organization in the brain through non-linear similarity embeddings A Mahfouz, M van de Giessen, L van der Maaten, S Huisman, M Reinders, ... Methods 73, 79–89, 2014 | 77 | 2014 |
| Transcriptomic signatures of brain regional vulnerability to Parkinson’s disease A Keo, A Mahfouz, AMT Ingrassia, JP Meneboo, C Villenet, E Mutez, ... Communications Biology 3 (1), 1-12, 2020 | 72 | 2020 |
| Predicting cell populations in single cell mass cytometry data T Abdelaal, V van Unen, T Höllt, F Koning, MJT Reinders, A Mahfouz Cytometry Part A 95 (7), 769-781, 2019 | 59 | 2019 |
| Gene co-expression analysis identifies brain regions and cell types involved in migraine pathophysiology: a GWAS-based study using the Allen Human Brain Atlas E Eising, SMH Huisman, A Mahfouz, LS Vijfhuizen, V Anttila, BS Winsvold, ... Human genetics 135, 425-439, 2016 | 57 | 2016 |
| Hi-C chromatin interaction networks predict co-expression in the mouse cortex S Babaei, A Mahfouz, M Hulsman, BPF Lelieveldt, J de Ridder, ... PLoS computational biology 11 (5), e1004221, 2015 | 57 | 2015 |
| Shared pathways among autism candidate genes determined by co-expression network analysis of the developing human brain transcriptome A Mahfouz, MN Ziats, OM Rennert, BPF Lelieveldt, MJT Reinders Journal of Molecular Neuroscience 57, 580-594, 2015 | 56 | 2015 |
Marcel ReindersProfessor of Computer Science, Delft University of TechnologyVerified email at tudelft.nl
