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Brett Beaulieu-Jones
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Opportunities and obstacles for deep learning in biology and medicine
T Ching, DS Himmelstein, BK Beaulieu-Jones, AA Kalinin, BT Do, ...
Journal of the royal society interface 15 (141), 20170387, 2018
19162018
Privacy-preserving generative deep neural networks support clinical data sharing
BK Beaulieu-Jones, ZS Wu, C Williams, R Lee, SP Bhavnani, JB Byrd, ...
Circulation: Cardiovascular Quality and Outcomes 12 (7), e005122, 2019
3922019
Minimum information about clinical artificial intelligence modeling: the MI-CLAIM checklist
B Norgeot, G Quer, BK Beaulieu-Jones, A Torkamani, R Dias, ...
Nature medicine 26 (9), 1320-1324, 2020
3042020
Missing Data Imputation in the Electronic Health Record using Deeply Learned Autoencoders
BK Beaulieu-Jones, JH Moore, THEPROA ALS, CT CONSORTIUM
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 22, 207, 2016
2002016
Semi-supervised learning of the electronic health record for phenotype stratification
BK Beaulieu-Jones, CS Greene
Journal of biomedical informatics 64, 168-178, 2016
1962016
International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
GA Brat, GM Weber, N Gehlenborg, P Avillach, NP Palmer, L Chiovato, ...
NPJ digital medicine 3 (1), 109, 2020
1762020
Reproducibility of computational workflows is automated using continuous analysis
BK Beaulieu-Jones, CS Greene
Nature biotechnology 35 (4), 342-346, 2017
1552017
Characterizing and managing missing structured data in electronic health records: data analysis
BK Beaulieu-Jones, DR Lavage, JW Snyder, JH Moore, SA Pendergrass, ...
JMIR medical informatics 6 (1), e8960, 2018
1432018
Examining the use of real‐world evidence in the regulatory process
BK Beaulieu‐Jones, SG Finlayson, W Yuan, RB Altman, IS Kohane, ...
Clinical Pharmacology & Therapeutics 107 (4), 843-852, 2020
1392020
Machine learning for patient risk stratification: standing on, or looking over, the shoulders of clinicians?
BK Beaulieu-Jones, W Yuan, GA Brat, AL Beam, G Weber, M Ruffin, ...
NPJ digital medicine 4 (1), 62, 2021
992021
What every reader should know about studies using electronic health record data but may be afraid to ask
IS Kohane, BJ Aronow, P Avillach, BK Beaulieu-Jones, R Bellazzi, ...
Journal of medical Internet research 23 (3), e22219, 2021
872021
Privacy-preserving distributed deep learning for clinical data
BK Beaulieu-Jones, W Yuan, SG Finlayson, ZS Wu
arXiv preprint arXiv:1812.01484, 2018
632018
Mapping patient trajectories using longitudinal extraction and deep learning in the MIMIC-III critical care database
BK Beaulieu-Jones, P Orzechowski, JH Moore
Pacific symposium on biocomputing 2018: proceedings of the pacific symposium …, 2018
602018
Trends and focus of machine learning applications for health research
B Beaulieu-Jones, SG Finlayson, C Chivers, I Chen, M McDermott, ...
JAMA network open 2 (10), e1914051-e1914051, 2019
592019
Temporal bias in case-control design: preventing reliable predictions of the future
W Yuan, BK Beaulieu-Jones, KH Yu, SL Lipnick, N Palmer, J Loscalzo, ...
Nature communications 12 (1), 1107, 2021
532021
Long-term kidney function recovery and mortality after COVID-19-associated acute kidney injury: an international multi-centre observational cohort study
BWL Tan, BWQ Tan, ALM Tan, ER Schriver, A Gutiérrez-Sacristán, P Das, ...
EClinicalMedicine 55, 2023
362023
Johnny Israeli, Jack Lanchantin, Stephen Woloszynek, Anne E
T Ching, DS Himmelstein, BK Beaulieu-Jones, AA Kalinin, BT Do, ...
Carpenter, Avanti Shrikumar, Jinbo Xu, Evan M. Cofer, Christopher A …, 2018
352018
Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data
JG Klann, H Estiri, GM Weber, B Moal, P Avillach, C Hong, ALM Tan, ...
Journal of the American Medical Informatics Association 28 (7), 1411-1420, 2021
322021
International analysis of electronic health records of children and youth hospitalized with COVID-19 infection in 6 countries
FT Bourgeois, A Gutiérrez-Sacristán, MS Keller, M Liu, C Hong, ...
JAMA network open 4 (6), e2112596-e2112596, 2021
302021
The Pooled Resource Open-Access ALS Clinical Trials Consortium, Missing data imputation in the electronic health record using deeply learned autoencoders
BK Beaulieu-Jones, JH Moore
Proceedings of the Pacific Symposium on Biocomputing, Kohala Coast, HI, USA, 3-7, 2017
222017
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Articles 1–20