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Ignacio Ferrés
Ignacio Ferrés
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Year
Deciphering the unexplored Leptospira diversity from soils uncovers genomic evolution to virulence
R Thibeaux, G Iraola, I Ferrés, E Bierque, D Girault, ME Soupé-Gilbert, ...
Microbial genomics 4 (1), e000144, 2018
1432018
Leptospira venezuelensis sp. nov., a new member of the intermediate group isolated from rodents, cattle and humans
R Puche, I Ferrés, L Caraballo, Y Rangel, M Picardeau, H Takiff, G Iraola
International Journal of Systematic and Evolutionary Microbiology 68 (2 …, 2018
442018
MLSTar: automatic multilocus sequence typing of bacterial genomes in R
I Ferrés, G Iraola
PeerJ 6, e5098, 2018
252018
Recurrent dissemination of SARS-CoV-2 through the Uruguayan–Brazilian border
D Mir, N Rego, PC Resende, F Tort, T Fernández-Calero, V Noya, ...
Frontiers in Microbiology 12, 653986, 2021
232021
An effective COVID-19 response in South America: the uruguayan conundrum
P Moreno, G Moratorio, G Iraola, Á Fajardo, F Aldunate, M Pereira-Gómez, ...
MedRxiv, 2020.07. 24.20161802, 2020
232020
Real-time genomic surveillance for SARS-CoV-2 variants of concern, Uruguay
N Rego, A Costábile, M Paz, C Salazar, P Perbolianachis, ...
Emerging Infectious Diseases 27 (11), 2957, 2021
20*2021
Identification of Antarctic culturable bacteria able to produce diverse enzymes of potential biotechnological interest
I Ferrés, V Amarelle, F Noya, E Fabiano
Advances in Polar Science 26 (1-English), 71, 2015
17*2015
Multiple introductions, regional spread and local differentiation during the first week of COVID-19 epidemic in Montevideo, Uruguay
C Salazar, F Díaz-Viraqué, M Pereira-Gómez, I Ferrés, P Moreno, ...
BioRXiv, 2020.05. 09.086223, 2020
152020
An object-oriented framework for evolutionary pangenome analysis
I Ferrés, G Iraola
Cell Reports Methods 1 (5), 100085, 2021
14*2021
Improved detection and classification of plasmids from circularized and fragmented assemblies
M Giménez, I Ferrés, G Iraola
bioRxiv, 2022.08. 04.502827, 2022
112022
Emergence and spread of a B. 1.1. 28-derived P. 6 lineage with Q675H and Q677H spike mutations in Uruguay
N Rego, C Salazar, M Paz, A Costábile, A Fajardo, I Ferrés, ...
Viruses 13 (9), 1801, 2021
102021
Pangenome analysis reveals genetic isolation in Campylobacter hyointestinalis subspecies adapted to different mammalian hosts
D Costa, S Lévesque, N Kumar, P Fresia, I Ferrés, TD Lawley, G Iraola
Scientific Reports 11 (1), 3431, 2021
102021
Genomic and clinical evidence uncovers the enterohepatic species Helicobacter valdiviensis as a potential human intestinal pathogen
P Fresia, R Jara, R Sierra, I Ferrés, G Greif, G Iraola, L Collado
Helicobacter 22 (5), e12425, 2017
102017
Phylen: automatic phylogenetic reconstruction using the EggNOG database
I Ferrés, G Iraola
The Journal of Open Source Software 3 (25), 593, 2018
82018
Construction and screening of a functional metagenomic library to identify novel enzymes produced by Antarctic bacteria
I Ferrés, V Amarelle, F Noya, E Fabiano
Advances in Polar Science 26 (1-English), 96, 2015
8*2015
Protocol for post-processing of bacterial pangenome data using Pagoo pipeline
I Ferrés, G Iraola
STAR protocols 2 (4), 100802, 2021
72021
simurg: simulate bacterial pangenomes in R
I Ferrés, P Fresia, G Iraola
Bioinformatics 36 (4), 1273-1274, 2020
72020
Case Report: Early Transcontinental Import of SARS-CoV-2 Variant of Concern 202012/01 (B. 1.1. 7) From Europe to Uruguay
C Salazar, A Costabile, I Ferrés, P Perbolianachis, M Pereira-Gómez, ...
Frontiers in Virology 1, 685618, 2021
32021
Draft Genome Sequences of 40 Pathogenic Leptospira Strains Isolated from Cattle in Uruguay
C Nieves, I Ferrés, F Díaz-Viraqué, A Buschiazzo, L Zarantonelli, G Iraola
Microbiology Resource Announcements 8 (47), 10.1128/mra. 00893-19, 2019
32019
Fast and cost-effective SARS-CoV-2 variant detection using Oxford Nanopore full-length spike gene sequencing
C Salazar, I Ferrés, M Paz, A Costábile, G Moratorio, P Moreno, G Iraola
Microbial Genomics 9 (5), 001013, 2023
12023
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Articles 1–20