Sandeep Krishna

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Mogens H. JensenProfessor of Complex Systems, Niels Bohr InstituteVerified email at nbi.dk
Kim SneppenProfessor at Niels Bohr Institute, Copenhagen UniversityVerified email at nbi.dk
szabolcs semseySNIPRBiomeVerified email at sniprbiome.com
Sanjay JainDepartment of Physics and Astrophysics, University of DelhiVerified email at physics.du.ac.in
Ian B DoddUniversity of AdelaideVerified email at adelaide.edu.au
Aswin Sai Narain SeshasayeeNational Centre for Biological Sciences, Tata Institute of Fundamental ResearchVerified email at ncbs.res.in
Sunil LaxmanInstitute for Stem Cell Science and Regenerative Medicine (inStem), UTSW, U WashingtonVerified email at instem.res.in
Eric MasseUniversity of SherbrookeVerified email at usherbrooke.ca
Sergei MaslovProfessor of Bioengineering and Physics, University of Illinois Urbana-ChampaignVerified email at illinois.edu
Sine Lo SvenningsenAssociate Professor, University of CopenhagenVerified email at bio.ku.dk
Keith ShearwinUniversity of AdelaideVerified email at adelaide.edu.au
Rahul SiddharthanProfessor, The Institute of Mathematical Sciences, ChennaiVerified email at imsc.res.in
Benjamin KerrProfessor of Biology, University of WashingtonVerified email at uw.edu
GV ShivashankarETH Zurich and Paul Scherrer Institute, SwitzerlandVerified email at ethz.ch
SAVAS TAYUNIVERSITY OF CHICAGOVerified email at uchicago.edu
Nan HaoThe University of AdelaideVerified email at adelaide.edu.au
Raghu PadinjatCambridge,Babraham, NCBSVerified email at ncbs.res.in

Sandeep Krishna

Simons Centre for the Study of Living Machines, National Centre for Biological Sciences, Bangalore

Verified email at ncbs.res.in - Homepage

Models of life


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A model for the emergence of cooperation, interdependence, and structure in evolving networks S Jain, S Krishna Proceedings of the National Academy of Sciences 98 (2), 543-547, 2001	311	2001
Autocatalytic sets and the growth of complexity in an evolutionary model S Jain, S Krishna Physical Review Letters 81 (25), 5684, 1998	284	1998
Minimal model of spiky oscillations in NF-κB signaling S Krishna, MH Jensen, K Sneppen Proceedings of the National Academy of Sciences 103 (29), 10840-10845, 2006	203	2006
Oscillation patterns in negative feedback loops S Pigolotti, S Krishna, MH Jensen Proceedings of the National Academy of Sciences 104 (16), 6533-6537, 2007	177	2007
Oscillations and temporal signalling in cells G Tiana, S Krishna, S Pigolotti, MH Jensen, K Sneppen Physical biology 4 (2), R1, 2007	146	2007
Coexistence of phage and bacteria on the boundary of self-organized refuges S Heilmann, K Sneppen, S Krishna Proceedings of the National Academy of Sciences 109 (31), 12828-12833, 2012	142	2012
Large extinctions in an evolutionary model: The role of innovation and keystone species S Jain, S Krishna Proceedings of the National Academy of Sciences 99 (4), 2055-2060, 2002	134	2002
Simplified models of biological networks K Sneppen, S Krishna, S Semsey Annual review of biophysics 39 (1), 43-59, 2010	129	2010
Toolbox model of evolution of prokaryotic metabolic networks and their regulation S Maslov, S Krishna, TY Pang, K Sneppen Proceedings of the National Academy of Sciences 106 (24), 9743-9748, 2009	125	2009
Genetic regulation of fluxes: iron homeostasis of Escherichia coli S Semsey, AMC Andersson, S Krishna, MH Jensen, E Massé, K Sneppen Nucleic acids research 34 (17), 4960-4967, 2006	104	2006
On chaotic dynamics in transcription factors and the associated effects in differential gene regulation ML Heltberg, S Krishna, MH Jensen Nature communications 10 (1), 71, 2019	100	2019
16 Graph theory and the evolution of autocatalytic networks S Jain, S Krishna Handbook of graphs and networks: from the genome to the internet, 2006	99	2006
Low degree metabolites explain essential reactions and enhance modularity in biological networks A Samal, S Singh, V Giri, S Krishna, N Raghuram, S Jain BMC bioinformatics 7, 1-10, 2006	96	2006
Efficient degradation and expression prioritization with small RNAs N Mitarai, AMC Andersson, S Krishna, S Semsey, K Sneppen Physical biology 4 (3), 164, 2007	93	2007
Sustainability of virulence in a phage-bacterial ecosystem S Heilmann, K Sneppen, S Krishna Journal of virology 84 (6), 3016-3022, 2010	91	2010
Dynamic features of gene expression control by small regulatory RNAs N Mitarai, JAM Benjamin, S Krishna, S Semsey, Z Csiszovszki, E Massé, ... Proceedings of the National Academy of Sciences 106 (26), 10655-10659, 2009	90	2009
Modeling oscillatory control in NF-κB, p53 and Wnt signaling B Mengel, A Hunziker, L Pedersen, A Trusina, MH Jensen, S Krishna Current opinion in genetics & development 20 (6), 656-664, 2010	88	2010
Why do bacteria regulate public goods by quorum sensing?—How the shapes of cost and benefit functions determine the form of optimal regulation S Heilmann, S Krishna, B Kerr Frontiers in microbiology 6, 767, 2015	86	2015
Tapestry: A single-round smart pooling technique for COVID-19 testing S Ghosh, A Rajwade, S Krishna, N Gopalkrishnan, TE Schaus, ... MedRxiv, 2020.04. 23.20077727, 2020	74	2020
Modeling the NF-κB mediated inflammatory response predicts cytokine waves in tissue P Yde, B Mengel, MH Jensen, S Krishna, A Trusina BMC Systems Biology 5, 1-9, 2011	72	2011

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