Qualimap: evaluating next-generation sequencing alignment data F García-Alcalde, K Okonechnikov, J Carbonell, LM Cruz, S Götz, ... Bioinformatics 28 (20), 2678-2679, 2012 | 1007 | 2012 |
Genomics of the origin and evolution of Citrus GA Wu, J Terol, V Ibanez, A López-García, E Pérez-Román, C Borredá, ... Nature 554 (7692), 311, 2018 | 738 | 2018 |
MRI denoising using non-local means JV Manjón, J Carbonell-Caballero, JJ Lull, G García-Martí, ... Medical image analysis 12 (4), 514-523, 2008 | 668 | 2008 |
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling I Medina, J Carbonell, L Pulido, SC Madeira, S Goetz, A Conesa, ... Nucleic acids research 38 (suppl 2), W210-W213, 2010 | 364 | 2010 |
Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection AD Ewing, KE Houlahan, Y Hu, K Ellrott, C Caloian, TN Yamaguchi, ... Nature methods 12 (7), 623, 2015 | 328 | 2015 |
A phylogenetic analysis of 34 chloroplast genomes elucidates the relationships between wild and domestic species within the genus Citrus J Carbonell-Caballero, R Alonso, V Ibañez, J Terol, M Talon, J Dopazo Molecular biology and evolution 32 (8), 2015 | 326 | 2015 |
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ... Nature communications 10 (1), 1-17, 2019 | 297 | 2019 |
The effects of death and post-mortem cold ischemia on human tissue transcriptomes PG Ferreira, M Muñoz-Aguirre, F Reverter, CPS Godinho, A Sousa, ... Nature communications 9 (1), 490, 2018 | 278 | 2018 |
Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing R Sánchez, F Serra, J Tárraga, I Medina, J Carbonell, L Pulido, ... Nucleic Acids Research 39 (suppl 2), W470-W474, 2011 | 246 | 2011 |
Babelomics 5.0: functional interpretation for new generations of genomic data R Alonso, F Salavert, F Garcia-Garcia, J Carbonell-Caballero, M Bleda, ... Nucleic acids research 43 (W1), W117-W121, 2015 | 140 | 2015 |
Sequencing and functional analysis of the genome of a nematode egg-parasitic fungus, Pochonia chlamydosporia E Larriba, MDLA Jaime, J Carbonell-Caballero, A Conesa, J Dopazo, ... Fungal Genetics and Biology 65, 69-80, 2014 | 137 | 2014 |
Increased amygdala and parahippocampal gyrus activation in schizophrenic patients with auditory hallucinations: an fMRI study using independent component analysis MJ Escartí, M de la Iglesia-Vayá, L Martí-Bonmatí, M Robles, J Carbonell, ... Schizophrenia research 117 (1), 31-41, 2010 | 109 | 2010 |
Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments F Al-Shahrour, J Carbonell, P Minguez, S Goetz, A Conesa, J Tárraga, ... Nucleic acids research 36 (suppl 2), W341-W346, 2008 | 95 | 2008 |
High throughput estimation of functional cell activities reveals disease mechanisms and predicts relevant clinical outcomes MR Hidalgo, C Cubuk, A Amadoz, F Salavert, J Carbonell-Caballero, ... Oncotarget 8 (3), 5160, 2017 | 91 | 2017 |
GEPAS, a web-based tool for microarray data analysis and interpretation J Tárraga, I Medina, J Carbonell, J Huerta-Cepas, P Minguez, E Alloza, ... Nucleic acids research 36 (suppl 2), W308-W314, 2008 | 88 | 2008 |
Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies I Medina, D Montaner, N Bonifaci, MA Pujana, J Carbonell, J Tarraga, ... Nucleic acids research 37 (suppl 2), W340-W344, 2009 | 87 | 2009 |
A nonparametric MRI inhomogeneity correction method JV Manjón, JJ Lull, J Carbonell-Caballero, G García-Martí, ... Medical image analysis 11 (4), 336-345, 2007 | 81 | 2007 |
Robust MRI brain tissue parameter estimation by multistage outlier rejection JV Manjon, J Tohka, G García‐Martí, J Carbonell‐Caballero, JJ Lull, ... Magnetic Resonance in Medicine 59 (4), 866-873, 2008 | 72 | 2008 |
Fibroblasts activation and abnormal extracellular matrix remodelling as common hallmarks in three cancer‐prone genodermatoses E Chacón‐Solano, C León, F Díaz, F García‐García, M García, ... British Journal of Dermatology, 2019 | 63 | 2019 |
Arginine citrullination at the C-terminal domain controls RNA polymerase II transcription P Sharma, A Lioutas, N Fernandez-Fuentes, J Quilez, ... Molecular cell 73 (1), 84-96. e7, 2019 | 63 | 2019 |