| Networks of genetic similarity reveal non-neutral processes shape strain structure in Plasmodium falciparum Q He, S Pilosof, KE Tiedje, S Ruybal-Pesántez, Y Artzy-Randrup, ... Nature communications 9 (1), 1817, 2018 | 44 | 2018 |
| Competition for hosts modulates vast antigenic diversity to generate persistent strain structure in Plasmodium falciparum S Pilosof, Q He, KE Tiedje, S Ruybal-Pesántez, KP Day, M Pascual PLoS biology 17 (6), e3000336, 2019 | 41 | 2019 |
| Population genomics of virulence genes of Plasmodium falciparum in clinical isolates from Uganda S Ruybal-Pesántez, KE Tiedje, G Tonkin-Hill, TS Rask, MR Kamya, ... Scientific Reports 7 (1), 11810, 2017 | 33 | 2017 |
| PacBio long-read amplicon sequencing enables scalable high-resolution population allele typing of the complex CYP2D6 locus S Charnaud, JE Munro, L Semenec, R Mazhari, J Brewster, C Bourke, ... Communications Biology 5 (1), 168, 2022 | 22 | 2022 |
| Evolutionary analyses of the major variant surface antigen-encoding genes reveal population structure of Plasmodium falciparum within and between continents G Tonkin-Hill, S Ruybal-Pesántez, KE Tiedje, V Rougeron, MF Duffy, ... PLoS Genetics 17 (2), e1009269, 2021 | 21 | 2021 |
| Age-specific patterns of DBLα var diversity can explain why residents of high malaria transmission areas remain susceptible to Plasmodium falciparum blood stage infection … S Ruybal-Pesántez, KE Tiedje, S Pilosof, G Tonkin-Hill, Q He, TS Rask, ... International Journal for Parasitology 52 (11), 721-731, 2022 | 18 | 2022 |
| Lack of geospatial population structure yet significant linkage disequilibrium in the reservoir of Plasmodium falciparum in Bongo District, Ghana S Ruybal-Pesántez, KE Tiedje, MM Rorick, L Amenga-Etego, A Ghansah, ... The American journal of tropical medicine and hygiene 97 (4), 1180, 2017 | 15 | 2017 |
| Indoor residual spraying with a non-pyrethroid insecticide reduces the reservoir of Plasmodium falciparum in a high-transmission area in northern Ghana KE Tiedje, AR Oduro, O Bangre, L Amenga-Etego, SK Dadzie, ... PLOS global public health 2 (5), e0000285, 2022 | 14 | 2022 |
| Signatures of competition and strain structure within the major blood‐stage antigen of Plasmodium falciparum in a local community in Ghana MM Rorick, Y Artzy‐Randrup, S Ruybal‐Pesántez, KE Tiedje, TS Rask, ... Ecology and evolution 8 (7), 3574-3588, 2018 | 13 | 2018 |
| Clinical malaria incidence following an outbreak in Ecuador was predominantly associated with Plasmodium falciparum with recombinant variant antigen gene … S Ruybal-Pesántez, FE Sáenz, S Deed, EK Johnson, DB Larremore, ... MedRxiv, 2021.04. 12.21255093, 2021 | 11 | 2021 |
| Molecular markers for malaria genetic epidemiology: progress and pitfalls S Ruybal-Pesántez, K McCann, J Vibin, S Siegel, S Auburn, AE Barry Trends in Parasitology, 2023 | 10 | 2023 |
| Identification of novel Plasmodium vivax proteins associated with protection against clinical malaria R Mazhari, E Takashima, RJ Longley, S Ruybal-Pesantez, MT White, ... Frontiers in Cellular and Infection Microbiology 13, 1076150, 2023 | 7 | 2023 |
| Evolution of Antimalarial Drug Resistance Markers in the Reservoir of Plasmodium falciparum Infections in the Upper East Region of Ghana CA Narh, A Ghansah, MF Duffy, S Ruybal-Pesántez, CO Onwona, ... The Journal of Infectious Diseases 222 (10), 1692-1701, 2020 | 7 | 2020 |
| SARS-CoV-2 multi-antigen serology assay R Mazhari, S Ruybal-Pesántez, F Angrisano, N Kiernan-Walker, S Hyslop, ... Methods and Protocols 4 (4), 72, 2021 | 6 | 2021 |
| Measuring changes in Plasmodium falciparum var census population size and structure in response to sequential malaria control interventions KE Tiedje, Q Zhan, S Ruybal-Pésantez, G Tonkin-Hill, Q He, MH Tan, ... medRxiv, 2023.05. 18.23290210, 2023 | 5 | 2023 |
| The impact of indoor residual spraying on Plasmodium falciparum microsatellite variation in an area of high seasonal malaria transmission in Ghana, West Africa DC Argyropoulos, S Ruybal‐Pesántez, SL Deed, AR Oduro, SK Dadzie, ... Molecular ecology 30 (16), 3974-3992, 2021 | 5 | 2021 |
| Molecular epidemiology of continued Plasmodium falciparum disease transmission after an outbreak in Ecuador S Ruybal-Pesántez, FE Sáenz, SL Deed, EK Johnson, DB Larremore, ... Frontiers in Tropical Diseases 4, 1085862, 2023 | 4 | 2023 |
| An accurate method for identifying recent recombinants from unaligned sequences Q Feng, KE Tiedje, S Ruybal-Pesántez, G Tonkin-Hill, MF Duffy, KP Day, ... Bioinformatics 38 (7), 1823-1829, 2022 | 4 | 2022 |
| Lassa fever outbreaks, mathematical models, and disease parameters: a systematic review and meta-analysis P Doohan, D Jorgensen, TM Naidoo, K McCain, JT Hicks, R McCabe, ... The Lancet Global Health 12 (12), e1962-e1972, 2024 | 2 | 2024 |
| Measuring changes in Plasmodium falciparum census population size in response to sequential malaria control interventions KE Tiedje, Q Zhan, S Ruybal-Pésantez, G Tonkin-Hill, Q He, MH Tan, ... medRxiv, 2023.05. 18.23290210, 2024 | 2 | 2024 |
