| Overview of BioCreative II gene mention recognition L Smith, LK Tanabe, CJ Kuo, I Chung, CN Hsu, YS Lin, R Klinger, ... Genome biology 9 (2), 1-19, 2008 | 442 | 2008 |
| BioC: a minimalist approach to interoperability for biomedical text processing DC Comeau, R Islamaj Doğan, P Ciccarese, KB Cohen, M Krallinger, ... Database 2013, 2013 | 189 | 2013 |
| The gene normalization task in BioCreative III Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, RTH Tsai, ... BMC bioinformatics 12, 1-19, 2011 | 162 | 2011 |
| Using machine learning for concept extraction on clinical documents from multiple data sources M Torii, K Wagholikar, H Liu Journal of the American Medical Informatics Association 18 (5), 580-587, 2011 | 153 | 2011 |
| dbOGAP-an integrated bioinformatics resource for protein O-GlcNAcylation J Wang, M Torii, H Liu, GW Hart, ZZ Hu BMC bioinformatics 12, 1-14, 2011 | 114 | 2011 |
| System and method for detecting, collecting, analyzing, and communicating event-related information PC Li, M Torii, DM Hartley, NP Nelson US Patent 10,002,034, 2018 | 111 | 2018 |
| BioTagger-GM: a gene/protein name recognition system M Torii, Z Hu, CH Wu, H Liu Journal of the American Medical Informatics Association 16 (2), 247-255, 2009 | 82 | 2009 |
| Feasibility of real-time satisfaction surveys through automated analysis of patients' unstructured comments and sentiments F Alemi, M Torii, L Clementz, DC Aron Quality Management in Healthcare 21 (1), 9-19, 2012 | 78 | 2012 |
| An exploratory study of a text classification framework for Internet-based surveillance of emerging epidemics M Torii, L Yin, T Nguyen, CT Mazumdar, H Liu, DM Hartley, NP Nelson International journal of medical informatics 80 (1), 56-66, 2011 | 75 | 2011 |
| System and method for detecting, collecting, analyzing, and communicating event-related information PC Li, JR Collmann, JW Blake, MG Polyak, JM Wilson, JI Yoon, M Torii, ... US Patent 9,529,974, 2016 | 67 | 2016 |
| Stability of steepest descent with momentum for quadratic functions M Torii, MT Hagan IEEE Transactions on Neural Networks 13 (3), 752-756, 2002 | 64 | 2002 |
| Quantitative assessment of dictionary-based protein named entity tagging H Liu, ZZ Hu, M Torii, C Wu, C Friedman Journal of the American Medical Informatics Association 13 (5), 497-507, 2006 | 50 | 2006 |
| RLIMS-P 2.0: a generalizable rule-based information extraction system for literature mining of protein phosphorylation information M Torii, CN Arighi, G Li, Q Wang, CH Wu, K Vijay-Shanker IEEE/ACM transactions on computational biology and bioinformatics 12 (1), 17-29, 2014 | 49 | 2014 |
| System and method for detecting, collecting, analyzing, and communicating emerging event-related information M Torii, DM Hartley, NP Nelson US Patent App. 13/883,515, 2013 | 49 | 2013 |
| Extracting health-related causality from twitter messages using natural language processing S Doan, EW Yang, SS Tilak, PW Li, DS Zisook, M Torii BMC medical informatics and decision making 19, 71-77, 2019 | 46 | 2019 |
| iSimp: A sentence simplification system for biomedical text Y Peng, CO Tudor, M Torii, CH Wu, K Vijay-Shanker Proceedings of the 2012 IEEE International Conference on Bioinformatics and …, 2012 | 40 | 2012 |
| A comparison study on algorithms of detecting long forms for short forms in biomedical text M Torii, Z Hu, M Song, CH Wu, H Liu BMC bioinformatics 8, 1-9, 2007 | 39 | 2007 |
| Risk factor detection for heart disease by applying text analytics in electronic medical records M Torii, J Fan, W Yang, T Lee, MT Wiley, DS Zisook, Y Huang Journal of biomedical informatics 58, S164-S170, 2015 | 38 | 2015 |
| An online literature mining tool for protein phosphorylation X Yuan, ZZ Hu, HT Wu, M Torii, M Narayanaswamy, KE Ravikumar, ... Bioinformatics 22 (13), 1668-1669, 2006 | 38 | 2006 |
| A hybrid approach to sentiment sentence classification in suicide notes S Sohn, M Torii, D Li, K Wagholikar, S Wu, H Liu Biomedical informatics insights 5, BII. S8961, 2012 | 33 | 2012 |
Hongfang LiuProfessor of Biomedical Informatics, Mayo ClinicVerified email at mayo.edu
