Nicolas Robine
Nicolas Robine
Director, Computational Biology. New York Genome Center
Verified email at - Homepage
Cited by
Cited by
Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences
LM Cox, S Yamanishi, J Sohn, AV Alekseyenko, JM Leung, I Cho, SG Kim, ...
Cell 158 (4), 705-721, 2014
Identification of functional elements and regulatory circuits by Drosophila modENCODE
S Roy, J Ernst, PV Kharchenko, P Kheradpour, N Negre, ML Eaton, ...
Science 330 (6012), 1787, 2010
Organoid profiling identifies common responders to chemotherapy in pancreatic cancer
H Tiriac, P Belleau, DD Engle, D Plenker, A Deschênes, TDD Somerville, ...
Cancer discovery 8 (9), 1112-1129, 2018
Conserved vertebrate mir-451 provides a platform for Dicer-independent, Ago2-mediated microRNA biogenesis
JS Yang, T Maurin, N Robine, KD Rasmussen, KL Jeffrey, R Chandwani, ...
Proceedings of the National Academy of Sciences 107 (34), 15163-15168, 2010
Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo
C Rouget, C Papin, A Boureux, AC Meunier, B Franco, N Robine, EC Lai, ...
Nature 467 (7319), 1128-1132, 2010
Detection of a recurrent DNAJB1-PRKACA chimeric transcript in fibrolamellar hepatocellular carcinoma
JN Honeyman, EP Simon, N Robine, R Chiaroni-Clarke, DG Darcy, ...
Science 343 (6174), 1010-1014, 2014
Histone H3 lysine 4 trimethylation marks meiotic recombination initiation sites
V Borde, N Robine, W Lin, S Bonfils, V Géli, A Nicolas
The EMBO journal 28 (2), 99-111, 2009
A broadly conserved pathway generates 3'UTR-directed primary piRNAs
N Robine, NC Lau, S Balla, Z Jin, K Okamura, S Kuramochi-Miyagawa, ...
Current Biology 19 (24), 2066-2076, 2009
Key parameters of tumor epitope immunogenicity revealed through a consortium approach improve neoantigen prediction
DK Wells, MM van Buuren, KK Dang, VM Hubbard-Lucey, KCF Sheehan, ...
Cell 183 (3), 818-834. e13, 2020
Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
E Berezikov, N Robine, A Samsonova, JO Westholm, A Naqvi, JH Hung, ...
Genome research 21 (2), 203-215, 2011
Immunogenic neoantigens derived from gene fusions stimulate T cell responses
W Yang, KW Lee, RM Srivastava, F Kuo, C Krishna, D Chowell, ...
Nature medicine 25 (5), 767-775, 2019
Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line
NC Lau, N Robine, R Martin, WJ Chung, Y Niki, E Berezikov, EC Lai
Genome research 19 (10), 1776-1785, 2009
Genome-wide cell-free DNA mutational integration enables ultra-sensitive cancer monitoring
A Zviran, RC Schulman, M Shah, STK Hill, S Deochand, CC Khamnei, ...
Nature medicine 26 (7), 1114-1124, 2020
Human papillomavirus and the landscape of secondary genetic alterations in oral cancers
ML Gillison, K Akagi, W Xiao, B Jiang, RKL Pickard, J Li, BJ Swanson, ...
Genome research 29 (1), 1-17, 2019
Identification of three rheumatoid arthritis disease subtypes by machine learning integration of synovial histologic features and RNA sequencing data
DE Orange, P Agius, EF DiCarlo, N Robine, H Geiger, J Szymonifka, ...
Arthritis & Rheumatology 70 (5), 690-701, 2018
Distinct classes of complex structural variation uncovered across thousands of cancer genome graphs
K Hadi, X Yao, JM Behr, A Deshpande, C Xanthopoulakis, H Tian, ...
Cell 183 (1), 197-210. e32, 2020
VAMP: visualization and analysis of array-CGH, transcriptome and other molecular profiles
PL Rosa, E Viara, P Hupe, G Pierron, S Liva, P Neuvial, I Brito, S Lair, ...
Bioinformatics 22 (17), 2066-2073, 2006
Genome-wide redistribution of meiotic double-strand breaks in Saccharomyces cerevisiae
N Robine, N Uematsu, F Amiot, X Gidrol, E Barillot, A Nicolas, V Borde
Molecular and cellular biology 27 (5), 1868, 2007
Structural insights into mis-regulation of protein kinase A in human tumors
J Cheung, C Ginter, M Cassidy, MC Franklin, MJ Rudolph, N Robine, ...
Proceedings of the National Academy of Sciences 112 (5), 1374-1379, 2015
Genome-wide somatic variant calling using localized colored de Bruijn graphs
G Narzisi, A Corvelo, K Arora, EA Bergmann, M Shah, R Musunuri, ...
Communications biology 1 (1), 20, 2018
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