Christopher Y Park
Christopher Y Park
Flatiron Institute, Simons Foundation
Verified email at
Cited by
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A majority of m6A residues are in the last exons, allowing the potential for 3′ UTR regulation
S Ke, EA Alemu, C Mertens, EC Gantman, JJ Fak, A Mele, B Haripal, ...
Genes & development 29 (19), 2037-2053, 2015
miRNA–target chimeras reveal miRNA 3′-end pairing as a major determinant of Argonaute target specificity
MJ Moore, TKH Scheel, JM Luna, CY Park, JJ Fak, E Nishiuchi, CM Rice, ...
Nature communications 6 (1), 8864, 2015
Whole-genome deep-learning analysis identifies contribution of noncoding mutations to autism risk
J Zhou*, CY Park*, CL Theesfeld*, AK Wong, Y Yuan, C Scheckel, JJ Fak, ...
Nature genetics 51 (6), 973-980, 2019
Rapid and accurate peptide identification from tandem mass spectra
CY Park, AA Klammer, L Kall, MJ MacCoss, WS Noble
Journal of proteome research 7 (7), 3022-3027, 2008
Regulatory consequences of neuronal ELAV-like protein binding to coding and non-coding RNAs in human brain
C Scheckel, E Drapeau, MA Frias, CY Park, J Fak, I Zucker-Scharff, Y Kou, ...
Elife 5, e10421, 2016
ZFP36 RNA-binding proteins restrain T cell activation and anti-viral immunity
MJ Moore, NE Blachere, JJ Fak, CY Park, K Sawicka, S Parveen, ...
Elife 7, e33057, 2018
IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks
AK Wong, CY Park, CS Greene, LA Bongo, Y Guan, OG Troyanskaya
Nucleic acids research 40 (W1), W484-W490, 2012
NOVA2-mediated RNA regulation is required for axonal pathfinding during development
Y Saito, S Miranda-Rottmann, M Ruggiu, CY Park, JJ Fak, R Zhong, ...
Elife 5, e14371, 2016
FMRP has a cell-type-specific role in CA1 pyramidal neurons to regulate autism-related transcripts and circadian memory
K Sawicka, CR Hale, CY Park, JJ Fak, JE Gresack, SJ Van Driesche, ...
Elife 8, e46919, 2019
Functional knowledge transfer for high-accuracy prediction of under-studied biological processes
CY Park, AK Wong, CS Greene, J Rowland, Y Guan, LA Bongo, ...
PLoS computational biology 9 (3), e1002957, 2013
PAPERCLIP identifies microRNA targets and a role of CstF64/64tau in promoting non-canonical poly (A) site usage
HW Hwang, CY Park, H Goodarzi, JJ Fak, A Mele, MJ Moore, Y Saito, ...
Cell reports 15 (2), 423-435, 2016
Statistical calibration of the SEQUEST XCorr function
AA Klammer, CY Park, WS Noble
Journal of proteome research 8 (4), 2106-2113, 2009
Interactive big data resource to elucidate human immune pathways and diseases
D Gorenshteyn, E Zaslavsky, M Fribourg, CY Park, AK Wong, A Tadych, ...
Immunity 43 (3), 605-614, 2015
cTag-PAPERCLIP reveals alternative polyadenylation promotes cell-type specific protein diversity and shifts Araf isoforms with microglia activation
HW Hwang, Y Saito, CY Park, NE Blachère, Y Tajima, JJ Fak, ...
Neuron 95 (6), 1334-1349. e5, 2017
Specific viral RNA drives the SARS CoV-2 nucleocapsid to phase separate
C Iserman, C Roden, M Boerneke, R Sealfon, G McLaughlin, I Jungreis, ...
BioRxiv, 2020
Genome-wide landscape of RNA-binding protein target site dysregulation reveals a major impact on psychiatric disorder risk
CY Park, J Zhou, AK Wong, KM Chen, CL Theesfeld, RB Darnell, ...
Nature genetics 53 (2), 166-173, 2021
Tissue-aware data integration approach for the inference of pathway interactions in metazoan organisms
CY Park, A Krishnan, Q Zhu, AK Wong, YS Lee, OG Troyanskaya
Bioinformatics 31 (7), 1093-1101, 2015
An automated framework for efficiently designing deep convolutional neural networks in genomics
Z Zhang, CY Park, CL Theesfeld, OG Troyanskaya
Nature Machine Intelligence 3 (5), 392-400, 2021
Simultaneous genome-wide inference of physical, genetic, regulatory, and functional pathway components
CY Park, DC Hess, C Huttenhower, OG Troyanskaya
PLoS computational biology 6 (11), e1001009, 2010
Tissue-specific enhancer functional networks for associating distal regulatory regions to disease
X Chen, J Zhou, R Zhang, AK Wong, CY Park, CL Theesfeld, ...
Cell systems 12 (4), 353-362. e6, 2021
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