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Mariusz Makowski
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Optimization of a Physics-Based United-Residue Force Field (UNRES) for Protein Folding Simulations
HAS Adam Liwo, Cezary Czaplewski, Stanisław Ołdziej, Urszula Kozłowska ...
Coarse-graining of condensed phase and biomolecular systems, 63, 2008
753*2008
Thermal behaviour of citric acid and isomeric aconitic acids
D Wyrzykowski, E Hebanowska, G Nowak-Wiczk, M Makowski, ...
Journal of Thermal Analysis and Calorimetry 104 (2), 731-735, 2011
2532011
Physics-based protein-structure prediction using a hierarchical protocol based on the UNRES force field: Assessment in two blind tests
S Ołdziej, C Czaplewski, A Liwo, M Chinchio, M Nanias, JA Vila, M Khalili, ...
Proceedings of the National Academy of Sciences 102 (21), 7547-7552, 2005
1752005
A unified coarse-grained model of biological macromolecules based on mean-field multipole–multipole interactions
A Liwo, M Baranowski, C Czaplewski, E Gołaś, Y He, D Jagieła, P Krupa, ...
Journal of molecular modeling 20, 1-15, 2014
1392014
Potential of mean force of association of large hydrophobic particles: Toward the nanoscale limit
M Makowski, C Czaplewski, A Liwo, HA Scheraga
The Journal of Physical Chemistry B 114 (2), 993-1003, 2010
892010
Simulation of protein structure and dynamics with the coarse-grained UNRES force field
A Liwo, C Czaplewski, S Ołdziej, AV Rojas, R Kazmierkiewicz, ...
Coarse-graining of condensed phase and biomolecular systems 1, 1391-1411, 2008
722008
Potential of mean force of hydrophobic association: Dependence on solute size
E Sobolewski, M Makowski, C Czaplewski, A Liwo, S Ołdziej, ...
The Journal of Physical Chemistry B 111 (36), 10765-10774, 2007
682007
Further evidence for the absence of polyproline II stretch in the XAO peptide
J Makowska, S Rodziewicz-Motowidło, K Baginska, M Makowski, JA Vila, ...
Biophysical journal 92 (8), 2904-2917, 2007
632007
Quantum-chemical studies on the favored and rare tautomers of neutral and redox adenine
ED Raczyńska, M Makowski, K Zientara-Rytter, K Kolczyńska, ...
The Journal of Physical Chemistry A 117 (7), 1548-1559, 2013
542013
Ab Initio Studies on the Preferred Site of Protonation in Cytisine in the Gas Phase Water
ED Raczyńska, M Makowski, E Górnicka, M Darowska
International Journal of Molecular Sciences 6 (1), 143-156, 2005
522005
Influence of ionic strength on hydrophobic interactions in water: dependence on solute size and shape
M Bogunia, M Makowski
The Journal of Physical Chemistry B 124 (46), 10326-10336, 2020
492020
Geometric and energetic consequences of prototropy for adenine and its structural models–a review
ED Raczyńska, M Makowski, M Hallmann, B Kamińska
RSC advances 5 (46), 36587-36604, 2015
492015
A general method for the derivation of the functional forms of the effective energy terms in coarse-grained energy functions of polymers. I. Backbone potentials of coarse …
AK Sieradzan, M Makowski, A Augustynowicz, A Liwo
The Journal of Chemical Physics 146 (12), 2017
482017
Simple physics-based analytical formulas for the potentials of mean force for the interaction of amino acid side chains in water. IV. Pairs of different hydrophobic side chains
M Makowski, E Sobolewski, C Czaplewski, S Ołdziej, A Liwo, ...
The Journal of Physical Chemistry B 112 (36), 11385-11395, 2008
402008
Acid–base and hydrogen-bonding equilibria in aliphatic amine and carboxylic acid systems in non-aqueous solutions
J Zielińska, M Makowski, K Maj, A Liwo, L Chmurzyński
Analytica chimica acta 401 (1-2), 317-321, 1999
391999
Simple physics-based analytical formulas for the potentials of mean force for the interaction of amino acid side chains in water. 3. Calculation and parameterization of the …
M Makowski, E Sobolewski, C Czaplewski, A Liwo, S Ołdziej, JH No, ...
The Journal of Physical Chemistry B 111 (11), 2925-2931, 2007
382007
Acid–base equilibria in systems involving substituted pyridines in polar aprotic protophobic media and in the amphiprotic methanol
D Augustin-Nowacka, M Makowski, L Chmurzynski
Analytica chimica acta 418 (2), 233-240, 2000
382000
A comprehensive approach to the analysis of antibiotic-metal complexes
S Ramotowska, M Wysocka, J Brzeski, A Chylewska, M Makowski
TrAC Trends in Analytical Chemistry 123, 115771, 2020
372020
Ab Initio Study of Possible and Preferred Basic Site(s) in Polyfunctional N,N1-Dimethyl-N-cyanoformamidine
M Makowski, ED Raczyńska, L Chmurzyński
The Journal of Physical Chemistry A 105 (5), 869-874, 2001
352001
Simple physics-based analytical formulas for the potentials of mean force of the interaction of amino-acid side chains in water. VI. Oppositely charged side chains
M Makowski, A Liwo, HA Scheraga
The Journal of Physical Chemistry B 115 (19), 6130-6137, 2011
342011
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