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Philip A Cook
Philip A Cook
Department of Radiology, University of Pennsylvania
Verified email at pennmedicine.upenn.edu
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Year
N4ITK: improved N3 bias correction
NJ Tustison, BB Avants, PA Cook, Y Zheng, A Egan, PA Yushkevich, ...
IEEE transactions on medical imaging 29 (6), 1310-1320, 2010
41522010
A reproducible evaluation of ANTs similarity metric performance in brain image registration
BB Avants, NJ Tustison, G Song, PA Cook, A Klein, JC Gee
Neuroimage 54 (3), 2033-2044, 2011
34562011
Evidence for segregated and integrative connectivity patterns in the human basal ganglia
B Draganski, F Kherif, S Klöppel, PA Cook, DC Alexander, GJM Parker, ...
Journal of Neuroscience 28 (28), 7143-7152, 2008
7902008
Camino: Diffusion MRI reconstruction and processing
PA Cook, Y Bai, MG Hall, S Nedjati-Gilani, KK Seunarine, DC Alexander
7202005
Harmonization of cortical thickness measurements across scanners and sites
JP Fortin, N Cullen, YI Sheline, WD Taylor, I Aselcioglu, PA Cook, ...
Neuroimage 167, 104-120, 2018
5592018
Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements
NJ Tustison, PA Cook, A Klein, G Song, SR Das, JT Duda, BM Kandel, ...
Neuroimage 99, 166-179, 2014
5492014
An Open Source Multivariate Framework for n-Tissue Segmentation with Evaluation on Public Data
BB Avants, NJ Tustison, J Wu, PA Cook, JC Gee
Neuroinformatics 9, 381-400, 2011
4662011
Linked dimensions of psychopathology and connectivity in functional brain networks
CH Xia, Z Ma, R Ciric, S Gu, RF Betzel, AN Kaczkurkin, ME Calkins, ...
Nature communications 9 (1), 3003, 2018
2942018
Modular segregation of structural brain networks supports the development of executive function in youth
GL Baum, R Ciric, DR Roalf, RF Betzel, TM Moore, RT Shinohara, ...
Current Biology 27 (11), 1561-1572. e8, 2017
2882017
Medial temporal structures and memory functions in adolescents with heavy cannabis use
M Ashtari, B Avants, L Cyckowski, KL Cervellione, D Roofeh, P Cook, ...
Journal of psychiatric research 45 (8), 1055-1066, 2011
2582011
Statistical harmonization corrects site effects in functional connectivity measurements from multi‐site fMRI data
M Yu, KA Linn, PA Cook, ML Phillips, M McInnis, M Fava, MH Trivedi, ...
Human brain mapping 39 (11), 4213-4227, 2018
2182018
Quantitative assessment of structural image quality
AFG Rosen, DR Roalf, K Ruparel, J Blake, K Seelaus, LP Villa, R Ciric, ...
Neuroimage 169, 407-418, 2018
2092018
Development of structure–function coupling in human brain networks during youth
GL Baum, Z Cui, DR Roalf, R Ciric, RF Betzel, B Larsen, M Cieslak, ...
Proceedings of the National Academy of Sciences 117 (1), 771-778, 2020
1972020
White matter connections reflect changes in voluntary-guided saccades in pre-symptomatic Huntington's disease
S Klöppel, B Draganski, CV Golding, C Chu, Z Nagy, PA Cook, SL Hicks, ...
Brain 131 (1), 196-204, 2008
1872008
Heteromodal conceptual processing in the angular gyrus
MF Bonner, JE Peelle, PA Cook, M Grossman
Neuroimage 71, 175-186, 2013
1762013
Cognitive decline and reduced survival in C9orf72 expansion frontotemporal degeneration and amyotrophic lateral sclerosis
DJ Irwin, CT McMillan, J Brettschneider, DJ Libon, J Powers, K Rascovsky, ...
Journal of Neurology, Neurosurgery & Psychiatry 84 (2), 163-169, 2013
1672013
Dementia induces correlated reductions in white matter integrity and cortical thickness: a multivariate neuroimaging study with sparse canonical correlation analysis
BB Avants, PA Cook, L Ungar, JC Gee, M Grossman
Neuroimage 50 (3), 1004-1016, 2010
1672010
Mitigating head motion artifact in functional connectivity MRI
R Ciric, AFG Rosen, G Erus, M Cieslak, A Adebimpe, PA Cook, ...
Nature protocols 13 (12), 2801-2826, 2018
1592018
Optimal acquisition orders of diffusion‐weighted MRI measurements
PA Cook, M Symms, PA Boulby, DC Alexander
Journal of Magnetic Resonance Imaging: An Official Journal of the …, 2007
1582007
Childhood trauma history is linked to abnormal brain connectivity in major depression
M Yu, KA Linn, RT Shinohara, DJ Oathes, PA Cook, R Duprat, TM Moore, ...
Proceedings of the National Academy of Sciences 116 (17), 8582-8590, 2019
1172019
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