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Asher Pasha
Asher Pasha
Bioinformatician, University of Toronto
Dirección de correo verificada de utoronto.ca - Página principal
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The transcriptional landscape of polyploid wheat
RH Ramírez-González, P Borrill, D Lang, SA Harrington, J Brinton, ...
Science 361 (6403), eaar6089, 2018
7352018
ePlant: visualizing and exploring multiple levels of data for hypothesis generation in plant biology
J Waese, J Fan, A Pasha, H Yu, G Fucile, R Shi, M Cumming, LA Kelley, ...
The Plant Cell 29 (8), 1806-1821, 2017
3462017
Inference of longevity-related genes from a robust coexpression network of seed maturation identifies regulators linking seed storability to biotic defense-related pathways
K Righetti, JL Vu, S Pelletier, BL Vu, E Glaab, D Lalanne, A Pasha, ...
The plant cell 27 (10), 2692-2708, 2015
1792015
NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis
D Yan, V Easwaran, V Chau, M Okamoto, M Ierullo, M Kimura, A Endo, ...
Nature communications 7 (1), 13179, 2016
1562016
High Temporal-Resolution Transcriptome Landscape of Early Maize Seed Development
F Yi, W Gu, J Chen, N Song, X Gao, X Zhang, Y Zhou, X Ma, W Song, ...
The Plant Cell 31 (5), 974-992, 2019
1222019
An Updated Gene Atlas for Maize Reveals Organ‐Specific and Stress‐Induced Genes
GM Hoopes, JP Hamilton, JC Wood, E Esteban, A Pasha, B Vaillancourt, ...
The Plant Journal, 2018
1202018
Expression atlas and comparative coexpression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon
R Sibout, S Proost, BO Hansen, N Vaid, FM Giorgi, S Ho‐Yue‐Kuang, ...
New Phytologist 215 (3), 1009-1025, 2017
852017
The developmental transcriptome atlas of the biofuel crop Camelina sativa
S Kagale, J Nixon, Y Khedikar, A Pasha, NJ Provart, WE Clarke, V Bollina, ...
The Plant Journal 88 (5), 879-894, 2016
742016
Transcriptomics at Maize Embryo/Endosperm Interfaces Identifies a Transcriptionally Distinct Endosperm Subdomain Adjacent to the Embryo Scutellum
NM Doll, J Just, V Brunaud, J Caïus, A Grimault, N Depège-Fargeix, ...
The Plant Cell 32 (4), 833-852, 2020
642020
Regulation of cell type-specific immunity networks in Arabidopsis roots
C Rich-Griffin, R Eichmann, MU Reitz, S Hermann, K Woolley-Allen, ...
Plant Cell 32 (9), 2742-2762, 2020
612020
New BAR tools for mining expression data and exploring Cis‐elements in Arabidopsis thaliana
RS Austin, S Hiu, J Waese, M Ierullo, A Pasha, TT Wang, J Fan, C Foong, ...
The Plant Journal 88 (3), 490-504, 2016
602016
Innovation, conservation, and repurposing of gene function in root cell type development
K Kajala, M Gouran, L Shaar-Moshe, GA Mason, J Rodriguez-Medina, ...
Cell 184 (12), 3333-3348. e19, 2021
592021
Nod factors potentiate auxin signaling for transcriptional regulation and lateral root formation in Medicago truncatula
V Herrbach, X Chirinos, D Rengel, K Agbevenou, R Vincent, S Pateyron, ...
Journal of experimental botany 68 (3), 569-583, 2017
582017
The Transcriptional Landscape of Polyploid Wheats and their Diploid Ancestors during Embryogenesis and Grain Development
D Xiang, TD Quilichini, Z Liu, P Gao, Y Pan, Q Li, KT Nilsen, P Venglat, ...
The Plant Cell 31 (12), 2888-2911, 2019
572019
Tung Tree (Vernicia fordii) Genome provides a resource for understanding genome evolution and improved oil production
L Zhang, M Liu, H Long, W Dong, A Pasha, E Esteban, W Li, X Yang, Z Li, ...
Genomics, proteomics & bioinformatics 17 (6), 558-575, 2019
512019
An ‘eFP‐Seq Browser’for visualizing and exploring RNA sequencing data
A Sullivan, PK Purohit, NH Freese, A Pasha, E Esteban, J Waese, A Wu, ...
The Plant Journal 100 (3), 641-654, 2019
442019
Expression atlas of Selaginella moellendorffii provides insights into the evolution of vasculature, secondary metabolism, and roots
C Ferrari, D Shivhare, BO Hansen, A Pasha, E Esteban, NJ Provart, ...
The Plant Cell 32 (4), 853-870, 2020
392020
Transcriptional landscapes of floral meristems in barley
J Thiel, R Koppolu, C Trautewig, C Hertig, SM Kale, S Erbe, M Mascher, ...
Science Advances 7 (18), eabf0832, 2021
372021
Proteome-Wide, Structure-Based Prediction of Protein-protein Interactions/New Molecular Interactions Viewer
S Dong, V Lau, R Song, M Ierullo, E Esteban, Y Wu, T Sivieng, ...
Plant Physiology, pp. 01216.2018, 2019
362019
Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics
TW Kim, CH Park, CC Hsu, YW Kim, YW Ko, Z Zhang, JY Zhu, YC Hsiao, ...
The Plant Cell 35 (3), 975-993, 2023
342023
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