Hector Corrada Bravo
Hector Corrada Bravo
Associate Professor of Computer Science, University of Maryland
Dirección de correo verificada de - Página principal
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Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
MJ Aryee, AE Jaffe, H Corrada-Bravo, C Ladd-Acosta, AP Feinberg, ...
Bioinformatics 30 (10), 1363-1369, 2014
Orchestrating high-throughput genomic analysis with Bioconductor
W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ...
Nature methods 12 (2), 115-121, 2015
Differential abundance analysis for microbial marker-gene surveys
JN Paulson, OC Stine, HC Bravo, M Pop
Nature methods 10 (12), 1200-1202, 2013
Tackling the widespread and critical impact of batch effects in high-throughput data
JT Leek, RB Scharpf, HC Bravo, D Simcha, B Langmead, WE Johnson, ...
Nature Reviews Genetics 11 (10), 733-739, 2010
Increased methylation variation in epigenetic domains across cancer types
KD Hansen, W Timp, HC Bravo, S Sabunciyan, B Langmead, ...
Nature genetics 43 (8), 768-775, 2011
Multivariable association discovery in population-scale meta-omics studies
H Mallick, A Rahnavard, LJ McIver, S Ma, Y Zhang, LH Nguyen, TL Tickle, ...
PLoS computational biology 17 (11), e1009442, 2021
Comparative cellular analysis of motor cortex in human, marmoset and mouse
TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ...
Nature 598 (7879), 111-119, 2021
Automated classification of bird and amphibian calls using machine learning: A comparison of methods
MA Acevedo, CJ Corrada-Bravo, H Corrada-Bravo, LJ Villanueva-Rivera, ...
Ecological Informatics 4 (4), 206-214, 2009
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
A system for operational aerosol optical depth data assimilation over global oceans
C Kuang, PH McMurry, AV McCormick, FL Eisele, SH Lee, LH Young, ...
J. Geophys. Res 113 (D10), D10208, 2007
Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition
M Pop, AW Walker, J Paulson, B Lindsay, M Antonio, MA Hossain, ...
Genome biology 15, 1-12, 2014
metagenomeSeq: Statistical analysis for sparse high-throughput sequencing
JN Paulson, M Pop, HC Bravo
Bioconductor package 1 (0), 191, 2013
Reporting guidelines for human microbiome research: the STORMS checklist
C Mirzayi, A Renson, Genomic Standards Consortium, ...
Nature medicine 27 (11), 1885-1892, 2021
Large hypomethylated blocks as a universal defining epigenetic alteration in human solid tumors
W Timp, HC Bravo, OG McDonald, M Goggins, C Umbricht, M Zeiger, ...
Genome medicine 6, 1-11, 2014
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ...
Nature 598 (7879), 103-110, 2021
Benchmarking deep learning interpretability in time series predictions
AA Ismail, M Gunady, H Corrada Bravo, S Feizi
Advances in neural information processing systems 33, 6441-6452, 2020
Transcriptome Remodeling in Trypanosoma cruzi and Human Cells during Intracellular Infection
Y Li, S Shah-Simpson, K Okrah, AT Belew, J Choi, KL Caradonna, ...
PLoS pathogens 12 (4), e1005511, 2016
Influence of host gene transcription level and orientation on HIV-1 latency in a primary-cell model
L Shan, HC Yang, SA Rabi, HC Bravo, NS Shroff, RA Irizarry, H Zhang, ...
Journal of virology 85 (11), 5384-5393, 2011
matrixStats: Functions that Apply to Rows and Columns of Matrices (and to Vectors)
H Bengtsson
R package version 0.52 2, 2017, 2017
Overcoming bias and systematic errors in next generation sequencing data
MA Taub, H Corrada Bravo, RA Irizarry
Genome medicine 2, 1-5, 2010
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Artículos 1–20