Stephen Altschul
Stephen Altschul
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Basic local alignment search tool
SF Altschul, W Gish, W Miller, EW Myers, DJ Lipman
Journal of molecular biology 215 (3), 403-410, 1990
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
SF Altschul, TL Madden, AA Schäffer, J Zhang, Z Zhang, W Miller, ...
Nucleic acids research 25 (17), 3389-3402, 1997
Identification of FAP locus genes from chromosome 5q21
KW Kinzler, MC Nilbert, LK Su, B Vogelstein, TM Bryan, DB Levy, ...
Science 253 (5020), 661-665, 1991
Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes
S Karlin, SF Altschul
Proceedings of the National Academy of Sciences 87 (6), 2264-2268, 1990
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
RL Strausberg, EA Feingold, LH Grouse, JG Derge, RD Klausner, ...
Proceedings of the National Academy of Sciences of the United States of …, 2002
Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment
CE Lawrence, SF Altschul, MS Boguski, JS Liu, AF Neuwald, JC Wootton
science 262 (5131), 208-214, 1993
Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements
AA Schäffer, L Aravind, TL Madden, S Shavirin, JL Spouge, YI Wolf, ...
Nucleic acids research 29 (14), 2994-3005, 2001
Applications and statistics for multiple high-scoring segments in molecular sequences
S Karlin, SF Altschul
Proceedings of the National Academy of Sciences 90 (12), 5873-5877, 1993
Protein database searches using compositionally adjusted substitution matrices
SF Altschul, JC Wootton, EM Gertz, R Agarwala, A Morgulis, AA Schäffer, ...
The FEBS journal 272 (20), 5101-5109, 2005
A workbench for multiple alignment construction and analysis
GD Schuler, SF Altschul, DJ Lipman
Proteins: Structure, Function, and Bioinformatics 9 (3), 180-190, 1991
[27] Local alignment statistics
SF Altschul, W Gish
Methods in enzymology 266, 460-480, 1996
Issues in searching molecular sequence databases
SF Altschul, MS Boguski, W Gish, JC Wootton
Nature genetics 6 (2), 119-129, 1994
Amino acid substitution matrices from an information theoretic perspective
SF Altschul
Journal of molecular biology 219 (3), 555-565, 1991
A superfamily of conserved domains in DNA damage-responsive cell cycle checkpoint proteins.
P Bork, K Hofmann, P Bucher, AF Neuwald, SF Altschul, EV Koonin
The FASEB Journal 11 (1), 68-76, 1997
Iterated profile searches with PSI-BLAST—a tool for discovery in protein databases
SF Altschul, EV Koonin
Trends in biochemical sciences 23 (11), 444-447, 1998
Domain enhanced lookup time accelerated BLAST
GM Boratyn, AA Schäffer, R Agarwala, SF Altschul, DJ Lipman, ...
Biology direct 7 (1), 12, 2012
A tool for multiple sequence alignment
DJ Lipman, SF Altschul, JD Kececioglu
Proceedings of the National Academy of Sciences 86 (12), 4412-4415, 1989
Protein database searches for multiple alignments.
SF Altschul, DJ Lipman
Proceedings of the National Academy of Sciences 87 (14), 5509-5513, 1990
A public database for gene expression in human cancers
A Lal, AE Lash, SF Altschul, V Velculescu, L Zhang, RE McLendon, ...
Cancer Research 59 (21), 5403-5407, 1999
… Functional motifs…
EV Koonin, SF Altschul, P Bork
Nature genetics 13 (3), 266-268, 1996
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