PASTA 2.0: an improved server for protein aggregation prediction I Walsh, F Seno, SCE Tosatto, A Trovato Nucleic acids research 42 (W1), W301-W307, 2014 | 448 | 2014 |
Optimal shapes of compact strings A Maritan, C Micheletti, A Trovato, JR Banavar Nature 406 (6793), 287-290, 2000 | 332 | 2000 |
The PASTA server for protein aggregation prediction A Trovato, F Seno, SCE Tosatto Protein Engineering, Design & Selection 20 (10), 521-523, 2007 | 278 | 2007 |
Geometry and symmetry presculpt the free-energy landscape of proteins TX Hoang, A Trovato, F Seno, JR Banavar, A Maritan Proceedings of the National Academy of Sciences 101 (21), 7960-7964, 2004 | 249 | 2004 |
Insight into the structure of amyloid fibrils from the analysis of globular proteins A Trovato, F Chiti, A Maritan, F Seno PLoS computational biology 2 (12), e170, 2006 | 227 | 2006 |
Phase diagram of force-induced DNA unzipping in exactly solvable models D Marenduzzo, A Trovato, A Maritan Physical Review E 64 (3), 031901, 2001 | 131 | 2001 |
A condensation-ordering mechanism in nanoparticle-catalyzed peptide aggregation S Auer, A Trovato, M Vendruscolo PLoS Computational Biology 5 (8), e1000458, 2009 | 109 | 2009 |
Geometry and physics of proteins JR Banavar, A Maritan, C Micheletti, A Trovato Proteins: Structure, Function, and Bioinformatics 47 (3), 315-322, 2002 | 92 | 2002 |
Unified perspective on proteins: A physics approach JR Banavar, TX Hoang, A Maritan, F Seno, A Trovato Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 70 (4 …, 2004 | 84 | 2004 |
Consequences of relative cellular positioning on quorum sensing and bacterial cell-to-cell communication S Alberghini, E Polone, V Corich, M Carlot, F Seno, A Trovato, A Squartini FEMS Microbiology Letters 292 (2), 149-161, 2009 | 81 | 2009 |
Exploring the universe of protein structures beyond the Protein Data Bank P Cossio, A Trovato, F Pietrucci, F Seno, A Maritan, A Laio PLoS computational biology 6 (11), e1000957, 2010 | 76 | 2010 |
REPETITA: detection and discrimination of the periodicity of protein solenoid repeats by discrete Fourier transform L Marsella, F Sirocco, A Trovato, F Seno, SCE Tosatto Bioinformatics 25 (12), i289-i295, 2009 | 75 | 2009 |
Amyloidogenic potential of transthyretin variants: insights from structural and computational analyses L Cendron, A Trovato, F Seno, C Folli, B Alfieri, G Zanotti, R Berni Journal of Biological Chemistry 284 (38), 25832-25841, 2009 | 67 | 2009 |
A simple and efficient statistical potential for scoring ensembles of protein structures P Cossio, D Granata, A Laio, F Seno, A Trovato Scientific Reports 2 (1), 351, 2012 | 58 | 2012 |
Common attributes of native-state structures of proteins, disordered proteins, and amyloid TX Hoang, L Marsella, A Trovato, F Seno, JR Banavar, A Maritan Proceedings of the National Academy of Sciences 103 (18), 6883-6888, 2006 | 58 | 2006 |
Quorum vs. diffusion sensing: a quantitative analysis of the relevance of absorbing or reflecting boundaries A Trovato, F Seno, M Zanardo, S Alberghini, A Tondello, A Squartini FEMS microbiology letters 352 (2), 198-203, 2014 | 53 | 2014 |
Sequence and structural patterns detected in entangled proteins reveal the importance of co-translational folding M Baiesi, E Orlandini, F Seno, A Trovato Scientific Reports 9 (1), 8426, 2019 | 49 | 2019 |
Linking in domain-swapped protein dimers M Baiesi, E Orlandini, A Trovato, F Seno Scientific reports 6 (1), 33872, 2016 | 47 | 2016 |
Maximum entropy approach for deducing amino acid interactions in proteins F Seno, A Trovato, JR Banavar, A Maritan Physical review letters 100 (7), 078102, 2008 | 47 | 2008 |
Exploring the correlation between the folding rates of proteins and the entanglement of their native states M Baiesi, E Orlandini, F Seno, A Trovato Journal of Physics A: Mathematical and Theoretical 50 (50), 504001, 2017 | 43 | 2017 |