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Jean-Yves Trosset
Jean-Yves Trosset
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Year
Inhibition of protein–protein interactions: The discovery of druglike β‐catenin inhibitors by combining virtual and biophysical screening
JY Trosset, C Dalvit, S Knapp, M Fasolini, M Veronesi, S Mantegani, ...
Proteins: Structure, Function, and Bioinformatics 64 (1), 60-67, 2006
2222006
Prodock: Software package for protein modeling and docking
JY Trosset, HA Scheraga
Journal of computational chemistry 20 (4), 412-427, 1999
1821999
Assessment of docking poses: interactions-based accuracy classification (IBAC) versus crystal structure deviations
RT Kroemer, A Vulpetti, JJ McDonald, DC Rohrer, JY Trosset, ...
Journal of Chemical Information and Computer Sciences 44 (3), 871-881, 2004
1512004
Structure of the interferon-receptor complex determined by distance constraints from double-mutant cycles and flexible docking
LC Roisman, J Piehler, JY Trosset, HA Scheraga, G Schreiber
Proceedings of the National Academy of Sciences 98 (23), 13231-13236, 2001
1382001
Reaching the global minimum in docking simulations: a Monte Carlo energy minimization approach using Bezier splines
JY Trosset, HA Scheraga
Proceedings of the National Academy of Sciences 95 (14), 8011-8015, 1998
1271998
Hot spots in Tcf4 for the interaction with β-catenin
M Fasolini, X Wu, M Flocco, JY Trosset, U Oppermann, S Knapp
Journal of Biological Chemistry 278 (23), 21092-21098, 2003
982003
Synthetic biology for pharmaceutical drug discovery
JY Trosset, P Carbonell
Drug design, development and therapy, 6285-6302, 2015
962015
Hyperthermostable mutants of Bacillus licheniformis α-amylase: multiple amino acid replacements and molecular modelling
N Declerck, P Joyet, JY Trosset, J Garnier, C Gaillardin
Protein Engineering, Design and Selection 8 (10), 1029-1037, 1995
931995
Catecholic flavonoids acting as telomerase inhibitors
M Menichincheri, D Ballinari, A Bargiotti, L Bonomini, W Ceccarelli, ...
Journal of medicinal chemistry 47 (26), 6466-6475, 2004
792004
Pyridopyrimidinones derivatives as telomerase inhibitors
M Angiolini, D Ballinari, DF Bassini, L Bonomini, M Gude, ...
US Patent 7,019,002, 2006
422006
Structural examination of the influence of phosphorylation on the binding of fibrinopeptide A to bovine thrombin
MC Maurer, JL Peng, SS An, JY Trosset, A Henschen-Edman, ...
Biochemistry 37 (17), 5888-5902, 1998
421998
Novel scoring functions comprising QXP, SASA, and protein side-chain entropy terms
F Giordanetto, S Cotesta, C Catana, JY Trosset, A Vulpetti, PFW Stouten, ...
Journal of chemical information and computer sciences 44 (3), 882-893, 2004
402004
Flexible docking simulations: Scaled collective variable Monte Carlo minimization approach using Bezier splines, and comparison with a standard Monte Carlo algorithm
JY Trosset, HA Scheraga
Journal of computational chemistry 20 (2), 244-252, 1999
371999
Virtual screening to enrich a compound collection with CDK2 inhibitors using docking, scoring, and composite scoring models
S Cotesta, F Giordanetto, JY Trosset, P Crivori, RT Kroemer, PFW Stouten, ...
Proteins: Structure, Function, and Bioinformatics 60 (4), 629-643, 2005
322005
New general approach for determining the solution structure of a ligand bound weakly to a receptor: structure of a fibrinogen Aα‐like peptide bound to thrombin (S195A) obtained …
MC Maurer, JY Trosset, CC Lester, EE DiBella, HA Scheraga
Proteins: Structure, Function, and Bioinformatics 34 (1), 29-48, 1999
321999
In silico drug–target profiling
JY Trosset, C Cavé
Target Identification and Validation in Drug Discovery: Methods and …, 2019
312019
Structure-based target druggability assessment
JY Trosset, N Vodovar
Target Identification and Validation in Drug Discovery: Methods and …, 2013
202013
Interaction inhibitors of tcf-4 with beta-catenin
J Moll, S Knapp, C Dalvit, JY Trosset, M Sundstrom, S Mantegani
US Patent App. 10/482,755, 2004
192004
Computational protein design methods for synthetic biology
P Carbonell, JY Trosset
Computational Methods in Synthetic Biology, 3-21, 2015
132015
An Ockham Razor model of energy metabolism
R Khoodeeram, G Bernot, JY Trosset
advances in Systems and Synthetic Biology, 1925, 2017
122017
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