| Drug-Target Interaction Prediction by Learning From Local Information and Neighbors JP Mei, CK Kwoh, P Yang, XL Li, J Zheng Bioinformatics 29 (2), 238-245, 2013 | 378 | 2013 |
| Improving compound–protein interaction prediction by building up highly credible negative samples H Liu, J Sun, J Guan, J Zheng, S Zhou Bioinformatics 31 (12), i221-i229, 2015 | 230 | 2015 |
| Assignment of orthologous genes via genome rearrangement X Chen, J Zheng, Z Fu, P Nan, Y Zhong, S Lonardi, T Jiang IEEE/ACM Transactions on Computational Biology and Bioinformatics 2 (4), 302-315, 2005 | 195 | 2005 |
| SynLethDB: synthetic lethality database toward discovery of selective and sensitive anticancer drug targets J Guo, H Liu, J Zheng Nucleic acids research 44 (D1), D1011-D1017, 2016 | 136 | 2016 |
| Minimum Common String Partition Problem: Hardness and Approximations A Goldstein, P Kolman, J Zheng The Electronic Journal of Combinatorics 12 (R50), 1-18, 2005 | 128 | 2005 |
| SimBoolNet—a Cytoscape plugin for dynamic simulation of signaling networks J Zheng, D Zhang, PF Przytycki, R Zielinski, J Capala, TM Przytycka Bioinformatics 26 (1), 141-142, 2010 | 77 | 2010 |
| The crosstalk between EGF, IGF, and Insulin cell signaling pathways-computational and experimental analysis R Zielinski, PF Przytycki, J Zheng, D Zhang, TM Przytycka, J Capala BMC systems biology 3, 1-10, 2009 | 73 | 2009 |
| Oncogenic KRAS-associated gene signature defines co-targeting of CDK4/6 and MEK as a viable therapeutic strategy in colorectal cancer M Pek, S Yatim, Y Chen, J Li, M Gong, X Jiang, F Zhang, J Zheng, X Wu, ... Oncogene 36 (35), 4975-4986, 2017 | 69 | 2017 |
| Alternative splicing analysis in human monocytes and macrophages reveals MBNL1 as major regulator H Liu, PA Lorenzini, F Zhang, S Xu, MSM Wong, J Zheng, X Roca Nucleic Acids Research, 2018 | 52 | 2018 |
| Single-cell transcriptional analysis to uncover regulatory circuits driving cell fate decisions in early mouse development H Chen, J Guo, SK Mishra, P Robson, M Niranjan, J Zheng Bioinformatics 31 (7), 1060-1066, 2015 | 51 | 2015 |
| Computing the assignment of orthologous genes via genome rearrangement X Chen, J Zheng, Z Fu, P Nan, Y Zhong, S Lonardi, T Jiang Proc. 3rd Asia Pacific Bioinformatics Conference (APBC 2005), 363-378, 2005 | 49 | 2005 |
| Support for the Coelomata clade of animals from a rigorous analysis of the pattern of intron conservation J Zheng, IB Rogozin, EV Koonin, TM Przytycka Molecular Biology and Evolution 24 (11), 2583-2592, 2007 | 48 | 2007 |
| Sequencing of 15 622 gene‐bearing BAC s clarifies the gene‐dense regions of the barley genome M Muñoz‐Amatriaín, S Lonardi, MC Luo, K Madishetty, JT Svensson, ... The Plant Journal 84 (1), 216-227, 2015 | 43 | 2015 |
| Predicting antigenic variants of H1N1 influenza virus based on epidemics and pandemics using a stacking model R Yin, VH Tran, X Zhou, J Zheng, CK Kwoh PloS one 13 (12), e0207777, 2018 | 42 | 2018 |
| SL 2 MF: Predicting Synthetic Lethality in Human Cancers via Logistic Matrix Factorization Y Liu, M Wu, C Liu, X Li, J Zheng IEEE/ACM Transactions on Computational Biology and Bioinformatics 17 (3 …, 2020 | 38 | 2020 |
| Efficient selection of unique and popular oligos for large EST databases† J Zheng, TJ Close, T Jiang, S Lonardi Bioinformatics 20 (13), 2101-2112, 2004 | 38 | 2004 |
| In Silico Prediction of Synthetic Lethality by Meta-Analysis of Genetic Interactions, Functions, and Pathways in Yeast and Human Cancer M Wu, X Li, F Zhang, X Li, CK Kwoh, J Zheng Cancer informatics 13 (Suppl 3), 71 - 80, 2014 | 37 | 2014 |
| Syn-Lethality: An Integrative Knowledge Base of Synthetic Lethality towards Discovery of Selective Anticancer Therapies X Li, SK Mishra, M Wu, F Zhang, J Zheng BioMed Research International 2014, Article 196034, 7 pages, 2014 | 37 | 2014 |
| Detecting sequence polymorphisms associated with meiotic recombination hotspots in the human genome J Zheng, PP Khil, RD Camerini-Otero, TM Przytycka Genome biology 11, 1-15, 2010 | 37 | 2010 |
| HopLand: single-cell pseudotime recovery using continuous Hopfield network-based modeling of Waddington’s epigenetic landscape J Guo, J Zheng Bioinformatics 33 (14), i102-i109 (ISMB/ECCB 2017), 2017 | 35 | 2017 |
Chee Keong KWOHNanyang Technological UniversityVerified email at ntu.edu.sg
