| Global prioritizing disease candidate lncRNAs via a multi-level composite network Q Yao, L Wu, J Li, LG Yang, Y Sun, Z Li, S He, F Feng, H Li, Y Li Scientific reports 7 (1), 39516, 2017 | 54 | 2017 |
| PDXliver: a database of liver cancer patient derived xenograft mouse models S He, B Hu, C Li, P Lin, WG Tang, YF Sun, FYM Feng, W Guo, J Li, Y Xu, ... BMC cancer 18, 1-9, 2018 | 24 | 2018 |
| Integrative analysis reveals novel driver genes and molecular subclasses of hepatocellular carcinoma L Yang, Z Zhang, Y Sun, S Pang, Q Yao, P Lin, J Cheng, J Li, G Ding, ... Aging (albany NY) 12 (23), 23849, 2020 | 20 | 2020 |
| scMRMA: single cell multiresolution marker-based annotation J Li, Q Sheng, Y Shyr, Q Liu Nucleic acids research 50 (2), e7-e7, 2022 | 18 | 2022 |
| Beyond programmed death-ligand 1: B7-H6 emerges as a potential immunotherapy target in SCLC PL Thomas, SM Groves, YK Zhang, J Li, P Gonzalez-Ericsson, ... Journal of Thoracic Oncology 16 (7), 1211-1223, 2021 | 17 | 2021 |
| Cross-scale multi-instance learning for pathological image diagnosis R Deng, C Cui, LW Remedios, S Bao, RM Womick, S Chiron, J Li, ... Medical Image Analysis, 103124, 2024 | 6 | 2024 |
| Dysregulated ligand–receptor interactions from single-cell transcriptomics Q Liu, CY Hsu, J Li, Y Shyr Bioinformatics 38 (12), 3216-3221, 2022 | 6 | 2022 |
| Cross-scale attention guided multi-instance learning for Crohn’s disease diagnosis with pathological images R Deng, C Cui, LW Remedios, S Bao, RM Womick, S Chiron, J Li, ... International Workshop on Multiscale Multimodal Medical Imaging, 24-33, 2022 | 5 | 2022 |
| MxIF Q-score: Biology-Informed Quality Assurance for Multiplexed Immunofluorescence Imaging S Bao, J Li, C Cui, Y Tang, R Deng, LW Remedios, HH Lee, S Chiron, ... International Workshop on Medical Optical Imaging and Virtual Microscopy …, 2022 | 2 | 2022 |
| Beyond PD-L1: B7-H6 emerges as a potential immunotherapy target in small cell lung cancer PL Thomas, SM Groves, YK Zhang, J Li, P Gonzalez-Ericsson, ... Journal of thoracic oncology: official publication of the International …, 2021 | 2 | 2021 |
| Comparison of immune profiles between hepatocellular carcinoma subtypes X Pan, P Lin, F Feng, J Li, YY Li, W Dai, B Hu, XR Yang, J Fan, H Li, Y Li Biophysics Reports 6, 19-32, 2020 | 2 | 2020 |
| Systematic identification of rabbit lncrnas reveals functional roles in atherosclerosis J Li, Q Yao, F Feng, S He, P Lin, L Yang, C Yang, H Li, Y Li Biochimica et Biophysica Acta (BBA)-Molecular Basis of Disease 1864 (6 …, 2018 | 2 | 2018 |
| Single-cell and Spatial Transcriptomics Clustering with an Optimized Adaptive K-Nearest Neighbor Graph J Li, Y Shyr, Q Liu bioRxiv, 2023 | | 2023 |
| A Specialized Epithelial Cell Type Regulating Mucosal Immunity and Driving Human Crohn’s Disease J Li, AJ Simmons, S Chiron, MA Ramirez-Solano, N Tasneem, H Kaur, ... bioRxiv, 2023 | | 2023 |
| Topological-preserving membrane skeleton segmentation in multiplex immunofluorescence imaging S Bao, C Cui, J Li, Y Tang, HH Lee, R Deng, LW Remedios, X Yu, Q Yang, ... Medical Imaging 2023: Digital and Computational Pathology 12471, 62-71, 2023 | | 2023 |
