| TriClust: A Tool for Cross‐Species Analysis of Gene Regulation D Dede, H Oğul Molecular informatics 33 (5), 382-387, 2014 | 16 | 2014 |
| Multiclass classification of brain cancer with machine learning algorithms B Erkal, S Başak, A Çiloğlu, DD Şener 2020 Medical Technologies Congress (TIPTEKNO), 1-4, 2020 | 12 | 2020 |
| A three-way clustering approach to cross-species gene regulation analysis D Dede, H Oğul 2013 IEEE INISTA, 1-5, 2013 | 10 | 2013 |
| The future of food and nutrition in ELIXIR B Balech, L Brennan, EC de Santa Pau, D Cavalieri, S Coort, D D’Elia, ... F1000Research 11 (978), 978, 2022 | 9 | 2022 |
| Text-based experiment retrieval in genomic databases D Dede Şener, H Ogul, S Basak Journal of Information Science 50 (5), 1334-1344, 2024 | 2 | 2024 |
| İstatistiksel analiz yöntemleri ve makine öğrenme yöntemleri ile film başarı tahmini B Sarıkaya Başkent Üniversitesi Fen Bilimleri Enstitüsü, 2021 | 2 | 2021 |
| A content-based retrieval framework for whole metagenome sequencing samples DD Şener, D Santoni, G Felici, H Oğul Journal of Integrative Bioinformatics 15 (4), 20170067, 2018 | 1 | 2018 |
| Retrieving relevant time‐course experiments: a study on Arabidopsis microarrays DD Şener, H Oğul IET Systems Biology 10 (3), 87-93, 2016 | 1 | 2016 |
| Inferring similarity between time-series microarrays: A content-based approach DD Şener, H Oğul 2015 IEEE 2nd International Conference on Cybernetics (CYBCONF), 201-205, 2015 | 1 | 2015 |
| Sensitive prediction of bacterial type IV effectors K Açıcı, DD Şener, H Oğul 2014 18th National Biomedical Engineering Meeting, 1-5, 2014 | 1 | 2014 |
| Managing food and microbiome studies data using Fairspace, a flexible and FAIR data management platform E Grudzien, E., van der Horst, E., van den Bergh, F., Traka, M. H., Ng, D ... 14th International Conference on Semantic Web Applications and Tools for …, 2023 | | 2023 |
| The future of food and nutrition in ELIXIR DDŞ Balech, Bachir, Lorraine Brennan, Enrique Carrillo de Santa Pau, Duccio ... F1000Research 978 (11), 2022 | | 2022 |
| Functional integration of host transcriptomics and metabolomics to track inflammatory bowel diseases D Dede Sener, C Evelo 17th eNuGOweek “Immuno nutrigenomics: How to feed the immune system”, 2021 | | 2021 |
| Movie Success Prediction with Statistical Analysis Techniques and Machine Learning Methods B Sarikaya, D Dede Sener International Conference on Advanced Engineering, Technology and …, 2021 | | 2021 |
| Digestive Tract Diseases and the Microbiome: How to Functionally Integrate Host Transcriptomics and Metabolomics D Dede Sener, C Evelo Proceedings of the 4th European Summer School on Nutrigenomics (ESSN 2021 …, 2021 | | 2021 |
| A Comparison of Regression Analysis Methods for Beer Consumption DD Şener 11th International Statistics Congress (ISC2019), Bodrum, Türkiye, 2019 | | 2019 |
| Experiment retrieval in genomic databases D Dede Şener Başkent Üniversitesi Fen Bilimleri Enstitüsü, 2019 | | 2019 |
| Gen ifade veri tabanlarında içerik-tabanlı arama: bağlama özgü imzalar K AÇICI, ME ÇORAPÇIOĞLU, YK TERZİ, AU URAL, Fİ ŞAHİN, ... | | 2016 |
| YÜKSEK ÖLÇEKLİ GENOMIK VERININ ÇOK YÖNLÜ ANALİZİ D Dede Baskent Universitesi Fen Bilimleri Enstitusu, 2013 | | 2013 |
| EXPERIMENT RETRIEVAL IN GENOMIC DATABASES DD ŞENER | | |
