| Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis M Griesmann, Y Chang, X Liu, Y Song, G Haberer, MB Crook, ... Science 361 (6398), eaat1743, 2018 | 297 | 2018 |
| Candidatus Frankia Datiscae Dg1, the Actinobacterial Microsymbiont of Datisca glomerata, Expresses the Canonical nod Genes nodABC in Symbiosis with Its … T Persson, K Battenberg, IV Demina, T Vigil-Stenman, B Vanden Heuvel, ... PLoS One 10 (5), e0127630, 2015 | 91 | 2015 |
| An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH TV Nguyen, D Wibberg, K Battenberg, J Blom, B Vanden Heuvel, ... BMC genomics 17, 1-17, 2016 | 57 | 2016 |
| Frankia-Enriched Metagenomes from the Earliest Diverging Symbiotic Frankia Cluster: They Come in Teams TV Nguyen, D Wibberg, T Vigil-Stenman, F Berckx, K Battenberg, ... Genome biology and evolution 11 (8), 2273-2291, 2019 | 32 | 2019 |
| Distinctive Patterns of Flavonoid Biosynthesis in Roots and Nodules of Datisca glomerata and Medicago spp. Revealed by Metabolomic and Gene Expression … I Gifford, K Battenberg, A Vaniya, A Wilson, L Tian, O Fiehn, AM Berry Frontiers in plant science 9, 1463, 2018 | 24 | 2018 |
| Proposal of 'Candidatus Frankia californiensis', the uncultured symbiont in nitrogen-fixing root nodules of a phylogenetically broad group of hosts endemic to … P Normand, TV Nguyen, K Battenberg, AM Berry, BV Heuvel, ... International journal of systematic and evolutionary microbiology 67 (10 …, 2017 | 23 | 2017 |
| Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis. Science 361: eaat1743 M Griesmann, Y Chang, X Liu, Y Song, G Haberer, MB Crook, ... | 19 | 2018 |
| The influence of the host plant is the major ecological determinant of the presence of nitrogen-fixing root nodule symbiont cluster II Frankia species in soil K Battenberg, JA Wren, J Hillman, J Edwards, L Huang, AM Berry Applied and environmental microbiology 83 (1), e02661-16, 2017 | 15 | 2017 |
| Comparative Analysis of the Nodule Transcriptomes of Ceanothus thyrsiflorus (Rhamnaceae, Rosales) and Datisca glomerata (Datiscaceae, Cucurbitales) MG Salgado, R van Velzen, TV Nguyen, K Battenberg, AM Berry, ... Frontiers in Plant Science 9, 1629, 2018 | 13 | 2018 |
| Comparative Transcriptomic Analysis of Two Actinorhizal Plants and the Legume Medicago truncatula Supports the Homology of Root Nodule Symbioses and Is … K Battenberg, D Potter, CA Tabuloc, JC Chiu, AM Berry Frontiers in Plant Science 9, 1256, 2018 | 12 | 2018 |
| OrthoReD: a rapid and accurate orthology prediction tool with low computational requirement K Battenberg, EK Lee, JC Chiu, AM Berry, D Potter BMC bioinformatics 18 (1), 1-12, 2017 | 5 | 2017 |
| A flexible cross-platform single-cell data processing pipeline K Battenberg, ST Kelly, RA Ras, NA Hetherington, M Hayashi, A Minoda Nature Communications 13 (1), 6847, 2022 | 2 | 2022 |
| NDR1/HIN1-Like Protein 13 Interacts with Symbiotic Receptor Kinases and Regulates Nodulation in Lotus japonicus A Yamazaki, K Battenberg, Y Shimoda, M Hayashi Molecular Plant-Microbe Interactions 35 (9), 845-856, 2022 | 1 | 2022 |
| Evolution of root nodule symbiosis: Focusing on the transcriptional regulation from the genomic point of view K Battenberg, M Hayashi Plant Biotechnology 39 (1), 79-83, 2022 | 1 | 2022 |
| Gene losses resulting in specialized metabolism in the earliest divergent symbiotic Frankia clade can be linked to its low saprotrophic capabilities F Berckx, TV Nguyen, R Hilker, D Wibberg, K Battenberg, J Kalinowski, ... bioRxiv, 2022.05. 25.493452, 2022 | | 2022 |
| UniverSC: a flexible cross-platform single-cell data processing pipeline ST Kelly, K Battenberg, NA Hetherington, M Hayashi, A Minoda bioRxiv, 2021.01. 19.427209, 2021 | | 2021 |
| Genome reduction in the earliest divergent Frankia clade is responsible for its low saprotrophic capabilities F Berckx, TV Nguyen, R Hilker, D Wibberg, K Battenberg, A Berry, ... | | 2021 |
| Improved Understanding of Root Nodule Symbioses Through Actinorhizal Plants from Field Sampling to Bioinformatics K Battenberg University of California, Davis, 2017 | | 2017 |
| Cucurbitales vs. Rosales: Analysis of bacterial metabolism based on candidate gene expression profiling in root nodules of Datisca glomerata and Ceanothus thyrsiflorus TTV Nguyen, R Hilker, D Wibberg, K Battenberg, A Berry, J Kalinowski, ... | | 2017 |
| Metagenomes from the earliest divergent Frankia cluster: They come in teams TTV Nguyen, D Wibberg, T Vigil-Stenman, K Battenberg, K Demchenko, ... | | 2017 |
