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Battenberg Kai
Battenberg Kai
RIKEN, Yokohama, Plany Symbiosis Reserach Team
Dirección de correo verificada de ucdavis.edu
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Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis
M Griesmann, Y Chang, X Liu, Y Song, G Haberer, MB Crook, ...
Science 361 (6398), eaat1743, 2018
3462018
Candidatus Frankia Datiscae Dg1, the Actinobacterial Microsymbiont of Datisca glomerata, Expresses the Canonical nod Genes nodABC in Symbiosis with Its …
T Persson, K Battenberg, IV Demina, T Vigil-Stenman, B Vanden Heuvel, ...
PloS one 10 (5), e0127630, 2015
1012015
An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH
TV Nguyen, D Wibberg, K Battenberg, J Blom, B Vanden Heuvel, ...
BMC genomics 17, 1-17, 2016
632016
Frankia-Enriched Metagenomes from the Earliest Diverging Symbiotic Frankia Cluster: They Come in Teams
TV Nguyen, D Wibberg, T Vigil-Stenman, F Berckx, K Battenberg, ...
Genome biology and evolution 11 (8), 2273-2291, 2019
352019
Distinctive patterns of flavonoid biosynthesis in roots and nodules of Datisca glomerata and Medicago spp. revealed by metabolomic and gene expression profiles
I Gifford, K Battenberg, A Vaniya, A Wilson, L Tian, O Fiehn, AM Berry
Frontiers in plant science 9, 394650, 2018
352018
Proposal of 'Candidatus Frankia californiensis', the uncultured symbiont in nitrogen-fixing root nodules of a phylogenetically broad group of hosts endemic to …
P Normand, TV Nguyen, K Battenberg, AM Berry, BV Heuvel, ...
International journal of systematic and evolutionary microbiology 67 (10 …, 2017
242017
Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis. Science 361: eaat1743
M Griesmann, Y Chang, X Liu, Y Song, G Haberer, MB Crook, ...
202018
Comparative Transcriptomic analysis of two actinorhizal plants and the legume medicagotruncatula supports the homology of root nodule symbioses and is congruent with a two-step …
K Battenberg, D Potter, CA Tabuloc, JC Chiu, AM Berry
Frontiers in plant science 9, 356066, 2018
192018
Comparative analysis of the nodule transcriptomes of Ceanothus thyrsiflorus (Rhamnaceae, Rosales) and Datisca glomerata (Datiscaceae, Cucurbitales)
MG Salgado, R van Velzen, TV Nguyen, K Battenberg, AM Berry, ...
Frontiers in Plant Science 9, 413274, 2018
172018
The influence of the host plant is the major ecological determinant of the presence of nitrogen-fixing root nodule symbiont cluster II Frankia species in soil
K Battenberg, JA Wren, J Hillman, J Edwards, L Huang, AM Berry
Applied and environmental microbiology 83 (1), e02661-16, 2017
162017
A flexible cross-platform single-cell data processing pipeline
K Battenberg, ST Kelly, RA Ras, NA Hetherington, M Hayashi, A Minoda
Nature Communications 13 (1), 6847, 2022
92022
OrthoReD: a rapid and accurate orthology prediction tool with low computational requirement
K Battenberg, EK Lee, JC Chiu, AM Berry, D Potter
BMC bioinformatics 18, 1-12, 2017
62017
Comparative phylogenomics and phylotranscriptomics provide insights into the genetic complexity of nitrogen-fixing root-nodule symbiosis
Y Zhang, Y Fu, W Xian, X Li, Y Feng, F Bu, Y Shi, S Chen, R van Velzen, ...
Plant Communications 5 (1), 2024
52024
NDR1/HIN1-Like Protein 13 Interacts with Symbiotic Receptor Kinases and Regulates Nodulation in Lotus japonicus
A Yamazaki, K Battenberg, Y Shimoda, M Hayashi
Molecular Plant-Microbe Interactions 35 (9), 845-856, 2022
22022
Evolution of root nodule symbiosis: Focusing on the transcriptional regulation from the genomic point of view
K Battenberg, M Hayashi
Plant Biotechnology 39 (1), 79-83, 2022
22022
Gene losses resulting in specialized metabolism in the earliest divergent symbiotic Frankia clade can be linked to its low saprotrophic capabilities
F Berckx, T Van Nguyen, R Hilker, D Wibberg, K Battenberg, J Kalinowski, ...
bioRxiv, 2022.05. 25.493452, 2022
2022
UniverSC: a flexible cross-platform single-cell data processing pipeline
ST Kelly, K Battenberg, NA Hetherington, M Hayashi, A Minoda
bioRxiv, 2021.01. 19.427209, 2021
2021
Genome reduction in the earliest divergent Frankia clade is responsible for its low saprotrophic capabilities
F Berckx, TV Nguyen, R Hilker, D Wibberg, K Battenberg, A Berry, ...
2021
Distinctive Patterns of Flavonoid Biosynthesis in Roots and Nodules of Datisca glomerata
I Gifford, K Battenberg, A Vaniya
2018
Comparative Transcriptomic Analysis of Two Actinorhizal Plants and the Legume
K Battenberg, D Potter, CA Tabuloc
2018
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