Andrew I. Jewett
Andrew I. Jewett
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Cited by
Cited by
Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes
AL Sanborn, SSP Rao, SC Huang, NC Durand, MH Huntley, AI Jewett, ...
Proceedings of the National Academy of Sciences 112 (47), E6456-E6465, 2015
Moltemplate: A tool for coarse-grained modeling of complex biological matter and soft condensed matter physics
AI Jewett, D Stelter, J Lambert, SM Saladi, OM Roscioni, M Ricci, L Autin, ...
Journal of molecular biology 433 (11), 166841, 2021
Moltemplate a coarse-grained model assembly tool
AI Jewett, Z Zhuang, JE Shea
Biophysical Journal 104 (2), 169a, 2013
Effects of confinement in chaperonin assisted protein folding: rate enhancement by decreasing the roughness of the folding energy landscape
A Baumketner, A Jewett, JE Shea
Journal of molecular biology 332 (3), 701-713, 2003
Accelerated folding in the weak hydrophobic environment of a chaperonin cavity: creation of an alternate fast folding pathway
AI Jewett, A Baumketner, JE Shea
Proceedings of the National Academy of Sciences 101 (36), 13192-13197, 2004
Structural diversity of dimers of the Alzheimer amyloid-β (25–35) peptide and polymorphism of the resulting fibrils
G Wei, AI Jewett, JE Shea
Physical Chemistry Chemical Physics 12 (14), 3622-3629, 2010
Cooperativity, smooth energy landscapes and the origins of topology-dependent protein folding rates
AI Jewett, VS Pande, KW Plaxco
Journal of molecular biology 326 (1), 247-253, 2003
MINRMS: an efficient algorithm for determining protein structure similarity using root-mean-squared-distance
AI Jewett, CC Huang, TE Ferrin
Bioinformatics 19 (5), 625-634, 2003
Reconciling theories of chaperonin accelerated folding with experimental evidence
AI Jewett, JE Shea
Cellular and molecular life sciences 67, 255-276, 2010
Short FtsZ filaments can drive asymmetric cell envelope constriction at the onset of bacterial cytokinesis
Q Yao, AI Jewett, YW Chang, CM Oikonomou, M Beeby, CV Iancu, ...
The EMBO journal 36 (11), 1577-1589, 2017
Uncharacterized bacterial structures revealed by electron cryotomography
MJ Dobro, CM Oikonomou, A Piper, J Cohen, K Guo, T Jensen, ...
Journal of bacteriology 199 (17), 10.1128/jb. 00100-17, 2017
Sequence periodicity and secondary structure propensity in model proteins
G Bellesia, AI Jewett, JE Shea
Protein Science 19 (1), 141-154, 2010
Folding on the chaperone: yield enhancement through loose binding
AI Jewett, JE Shea
Journal of molecular biology 363 (5), 945-957, 2006
Integrated tools for structural and sequence alignment and analysis
CC Huang, WR Novak, PC Babbitt, AI Jewett, TE Ferrin, TE Klein
Biocomputing 2000, 230-241, 1999
The effect of surface tethering on the folding of the src-SH3 protein domain
Z Zhuang, AI Jewett, P Soto, JE Shea
Physical biology 6 (1), 015004, 2009
Assisted peptide folding by surface pattern recognition
Z Zhuang, AI Jewett, S Kuttimalai, G Bellesia, S Gnanakaran, JE Shea
Biophysical journal 100 (5), 1306-1315, 2011
Do chaperonins boost protein yields by accelerating folding or preventing aggregation?
AI Jewett, JE Shea
Biophysical Journal 94 (8), 2987-2993, 2008
A Jewett, A Lambert
version 2015-8-17. Http://www. moltemplate. org/(accessed Oct 26, 2017 …, 2019
Relative stability of de novo four–helix bundle proteins: Insights from coarse grained molecular simulations
G Bellesia, AI Jewett, JE Shea
Protein Science 20 (5), 818-826, 2011
Moltemplate manual
A Jewett
University of California, Santa Barbara Shea Lab (August 2015), 2020
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