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Michael E. Vinyard
Michael E. Vinyard
Harvard University, Broad Institute of MIT and Harvard, Massachusetts General Hospital
Verified email at g.harvard.edu - Homepage
Title
Cited by
Cited by
Year
Assessment of computational methods for the analysis of single-cell ATAC-seq data
H Chen, C Lareau, T Andreani, ME Vinyard, SP Garcia, K Clement, ...
Genome biology 20, 1-25, 2019
2542019
CRISPR-suppressor scanning reveals a nonenzymatic role of LSD1 in AML
ME Vinyard, C Su, AP Siegenfeld, AL Waterbury, AM Freedy, PM Gosavi, ...
Nature chemical biology 15 (5), 529-539, 2019
892019
SIMBA: single-cell embedding along with features
H Chen, J Ryu, ME Vinyard, A Lerer, L Pinello
Nature Methods, 1-11, 2023
182023
singlecellVR: interactive visualization of single-cell data in virtual reality
DF Stein, H Chen, ME Vinyard, Q Qin, RD Combs, Q Zhang, L Pinello
Frontiers in genetics 12, 764170, 2021
162021
Current progress and potential opportunities to infer single-cell developmental trajectory and cell fate
L Wang, Q Zhang, Q Qin, N Trasanidis, ME Vinyard, H Chen, L Pinello
Current Opinion in Systems Biology 26, 1-11, 2021
92021
Integrative dissection of gene regulatory elements at base resolution
Z Chen, N Javed, M Moore, J Wu, G Sun, M Vinyard, A Collins, L Pinello, ...
Cell Genomics 3 (6), 2023
82023
A molecular glue approach to control the half-life of CRISPR-based technologies
V Sreekanth, M Jan, KT Zhao, D Lim, JR Davis, M McConkey, V Kovalcik, ...
bioRxiv, 2023
22023
Single-cell RNA sequencing of rare circulating tumor cells in precursor myeloma patients reveals molecular underpinnings of tumor cell circulation
ED Lightbody, DT Firer, R Sklavenitis-Pistofidis, J Tsuji, MP Agius, ...
Blood 140 (Supplement 1), 602-603, 2022
12022
Defining and benchmarking open problems in single-cell analysis
M Luecken, S Gigante, D Burkhardt, R Cannoodt, D Strobl, N Markov, ...
2024
Differentiation of Acute Myeloid Leukemia Cells upon Pharmacological Inhibition of LSD1 Requires Its N-Terminal Intrinsically Disordered Region
HS Kwok, A Waterbury, C Lee, D Narducci, A Freedy, C Su, A Reiter, ...
Blood 142, 1416, 2023
2023
Single-Cell RNA Sequencing of Circulating Tumor Cells in Precursor Myeloma Patients Reveals Mechanisms of Disease Dissemination
ED Lightbody, R Sklavenitis-Pistofidis, DT Firer, J Tsuji, MP Agius, ...
Blood 142, 872, 2023
2023
Modeling single-cell dynamics using stochastic generative models based on neural differential equations
ME Vinyard, AW Rasmussen, R Li, L Pinello, G Getz
Cancer Research 83 (7_Supplement), 5371-5371, 2023
2023
scDiffEq: drift-diffusion modeling of single-cell dynamics with neural stochastic differential equations
ME Vinyard, A Rasmussen, R Li, G Getz, L Pinello
bioRxiv, 2023.12. 06.570508, 2023
2023
In Situ Characterization of Chromatin Landscape in Progression of Smoldering Precursor Stage to Multiple Myeloma
M Rahmat, M Vinyard, R Sklavenitis-Pistofidis, K Clement, ED Lightbody, ...
Blood 140 (Supplement 1), 4222-4223, 2022
2022
SIMBA: SIngle-cell eMBedding Along with features
L Pinello, H Chen, J Ryu, ME Vinyard, A Lerer
2022
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